Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC018992.1-201ENST00000523778 2149 ntBASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUEDC1Q9NWM3 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 MARK2P10-201ENST00000454959 1437 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 RNU5F-7P-201ENST00000363696 115 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 RNU6-660P-201ENST00000364566 109 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 Y_RNA.296-201ENST00000364930 108 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 RNU6-878P-201ENST00000384578 110 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 OR7E101P-201ENST00000400428 513 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AL109918.1-202ENST00000406724 436 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 RN7SKP117-201ENST00000410175 264 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 RN7SKP85-201ENST00000411349 318 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 CRIP1P3-201ENST00000416794 220 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 RPS7P8-201ENST00000418311 581 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 CDC42P6-201ENST00000421246 576 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC069157.1-201ENST00000421749 137 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 FBP2P1-202ENST00000424473 530 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 CLUHP1-201ENST00000435012 1190 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AL137074.1-201ENST00000442640 465 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 OR13K1P-201ENST00000444577 975 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC092421.1-201ENST00000448148 418 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 BX842559.2-201ENST00000451418 605 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AL590639.1-201ENST00000456484 337 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 SULT1D1P-201ENST00000458020 882 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 RPS20P4-201ENST00000461659 355 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 RN7SL861P-201ENST00000473793 285 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 LARP1BP2-201ENST00000486594 519 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 FAM172BP-201ENST00000487497 1089 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 RN7SL569P-201ENST00000494652 288 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 RPL15P21-201ENST00000495592 567 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AL445187.1-201ENST00000502685 260 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 CCDC11P1-201ENST00000503137 1162 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC122718.2-201ENST00000505325 591 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC022447.3-201ENST00000506865 495 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 MTND1P35-201ENST00000526739 508 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC068305.2-201ENST00000550567 1205 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC090826.1-203ENST00000569235 490 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 OR6L2P-201ENST00000608207 925 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AL442067.1-201ENST00000613261 223 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC023158.2-201ENST00000614876 543 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC027506.1-201ENST00000621395 198 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AP003400.3-201ENST00000624904 346 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 MT-RNR2-201ENST00000387347 1559 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 ZNF733P-202ENST00000444809 1573 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 MTND5P1-201ENST00000445440 1375 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms