Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 SNORA31.18-201ENST00000517043 134 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC022868.1-201ENST00000517767 391 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AL109766.1-201ENST00000555080 552 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 PSMA3P-201ENST00000555485 635 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AL359212.1-201ENST00000556608 614 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC091078.2-201ENST00000557145 559 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 STARD6-202ENST00000577499 696 ntTSL 2 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC234771.5-201ENST00000600161 514 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AL022067.1-201ENST00000602426 454 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AL606834.3-201ENST00000602615 496 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AP001836.1-201ENST00000604675 523 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 KATNBL1P5-201ENST00000605015 517 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 CYP1D1P-201ENST00000416662 1433 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC091544.5-201ENST00000620192 3815 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AKAP2-201ENST00000259318 3101 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 ALB-209ENST00000503124 1741 ntTSL 5 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 CARF-201ENST00000320443 5209 ntTSL 2 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 NLN-202ENST00000502464 8354 ntTSL 5 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 RNU6-564P-201ENST00000410983 104 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC105402.1-201ENST00000413336 545 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC138393.2-201ENST00000414742 246 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC245028.1-201ENST00000423259 256 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 SUMO1P3-201ENST00000439961 304 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC100832.1-201ENST00000471945 383 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC084024.2-201ENST00000503480 791 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 MTCYBP35-201ENST00000503630 1137 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 SUMO2P7-201ENST00000511179 285 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC004241.3-201ENST00000611728 517 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC006840.1-201ENST00000623069 542 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC006927.4-201ENST00000639187 543 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 AC016582.1-202ENST00000636341 2982 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 NCAM1-221ENST00000615112 5967 ntAPPRIS P5 TSL 5 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 CNTN4-203ENST00000418658 5093 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 RBM19-203ENST00000545145 4422 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 SNORD46.1-201ENST00000364139 104 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 RNU6-903P-201ENST00000391270 109 ntBASIC1.97□□□□□ -2.09
HMCN1Q96RW7 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMCN1Q96RW7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms