Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.49□□□□□ -1.69
GAFA1Q96PS6 RN7SKP59-201ENST00000410520 314 ntBASIC4.49□□□□□ -1.69
GAFA1Q96PS6 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 CYCSP12-201ENST00000437729 300 ntBASIC4.49□□□□□ -1.69
GAFA1Q96PS6 GAPDHP25-201ENST00000447061 1001 ntBASIC4.49□□□□□ -1.69
GAFA1Q96PS6 PPIAP20-201ENST00000449839 135 ntBASIC4.49□□□□□ -1.69
GAFA1Q96PS6 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 SIAH1P1-201ENST00000479411 923 ntBASIC4.49□□□□□ -1.69
GAFA1Q96PS6 RN7SL447P-201ENST00000494711 245 ntBASIC4.49□□□□□ -1.69
GAFA1Q96PS6 AC108693.1-201ENST00000496068 432 ntBASIC4.49□□□□□ -1.69
GAFA1Q96PS6 RPEP1-201ENST00000504507 658 ntBASIC4.49□□□□□ -1.69
GAFA1Q96PS6 HMGN1P9-201ENST00000515212 298 ntBASIC4.49□□□□□ -1.69
GAFA1Q96PS6 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 HMGB1P40-201ENST00000525121 540 ntBASIC4.49□□□□□ -1.69
GAFA1Q96PS6 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.49□□□□□ -1.69
GAFA1Q96PS6 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 AP001153.1-201ENST00000641024 338 ntBASIC4.49□□□□□ -1.69
GAFA1Q96PS6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 AC137056.2-201ENST00000624055 1958 ntBASIC4.49□□□□□ -1.69
GAFA1Q96PS6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.48□□□□□ -1.69
GAFA1Q96PS6 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 RN7SKP160-201ENST00000363804 340 ntBASIC4.48□□□□□ -1.69
GAFA1Q96PS6 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 OR4K12P-201ENST00000406538 961 ntBASIC4.48□□□□□ -1.69
GAFA1Q96PS6 RNA5SP487-201ENST00000410186 122 ntBASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AL133325.1-201ENST00000421090 382 ntBASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AL451063.1-201ENST00000450164 1133 ntBASIC4.48□□□□□ -1.69
GAFA1Q96PS6 IGBP1P4-201ENST00000503202 879 ntBASIC4.48□□□□□ -1.69
GAFA1Q96PS6 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 SNORA81.2-201ENST00000516868 170 ntBASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AC126177.5-201ENST00000549599 178 ntBASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AC009027.1-201ENST00000604510 479 ntBASIC4.48□□□□□ -1.69
GAFA1Q96PS6 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AC109583.2-201ENST00000617367 129 ntBASIC4.48□□□□□ -1.69
GAFA1Q96PS6 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AC099654.6-201ENST00000636487 512 ntBASIC4.48□□□□□ -1.69
GAFA1Q96PS6 SAMMSON-209ENST00000641222 1100 ntBASIC4.48□□□□□ -1.69
GAFA1Q96PS6 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.48□□□□□ -1.69
GAFA1Q96PS6 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 Z83820.1-201ENST00000456978 1499 ntBASIC4.48□□□□□ -1.69
GAFA1Q96PS6 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 AL078621.3-201ENST00000623707 2042 ntBASIC4.48□□□□□ -1.69
GAFA1Q96PS6 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GAFA1Q96PS6 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GAFA1Q96PS6 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.47□□□□□ -1.69
GAFA1Q96PS6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
GAFA1Q96PS6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.47□□□□□ -1.69
GAFA1Q96PS6 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GAFA1Q96PS6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GAFA1Q96PS6 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
GAFA1Q96PS6 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.47□□□□□ -1.69
GAFA1Q96PS6 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
GAFA1Q96PS6 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GAFA1Q96PS6 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.47□□□□□ -1.69
GAFA1Q96PS6 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms