Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AL139099.4-201ENST00000614802 114 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC245389.2-201ENST00000616023 576 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC242843.1-201ENST00000618702 573 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC021422.1-201ENST00000621212 473 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC090772.4-201ENST00000623599 362 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 AC005224.3-201ENST00000584683 2140 ntBASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.64□□□□□ -1.35
CDK5RAP3Q96JB5 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 OR4K17-201ENST00000315543 1032 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AC016739.1-201ENST00000405359 345 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AC099535.1-201ENST00000408928 371 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AL606490.7-201ENST00000433136 191 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AL138787.1-202ENST00000437804 898 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AC023141.8-201ENST00000442554 208 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AP002884.1-201ENST00000479691 655 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 RN7SL741P-201ENST00000482473 289 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 RPL38P3-201ENST00000484463 213 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AC091544.1-201ENST00000484702 348 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AC016550.3-201ENST00000515706 767 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 SCARNA18.1-201ENST00000516330 83 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 RNA5SP473-201ENST00000516402 125 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 MIR2117-201ENST00000516780 80 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 RNA5SP340-201ENST00000517132 107 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AC079905.1-201ENST00000549280 475 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AC005242.1-201ENST00000585658 438 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AP002884.5-201ENST00000595053 1132 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AC004775.1-201ENST00000607389 753 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AL136131.3-201ENST00000607600 188 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AL096803.3-201ENST00000609032 532 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AC108673.3-201ENST00000609183 335 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AL645927.2-201ENST00000618350 349 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AC025262.3-201ENST00000623666 360 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AL359955.1-201ENST00000455242 3275 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AC125336.1-201ENST00000508893 2827 ntBASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP3Q96JB5 AL161912.4-201ENST00000623889 2468 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 MTCO1P7-201ENST00000419523 1542 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC017002.4-201ENST00000604721 1525 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 RNFT1P3-201ENST00000340898 1052 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 RN7SKP128-201ENST00000364270 303 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms