Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC073488.7-201ENST00000633785 778 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 AC068044.1-201ENST00000441585 1978 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LRCH3Q96II8 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LRCH3Q96II8 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LRCH3Q96II8 LINC00663-203ENST00000586885 2546 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LRCH3Q96II8 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 AL049776.1-201ENST00000624600 2025 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 GFRAL-201ENST00000340465 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LRCH3Q96II8 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LRCH3Q96II8 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
LRCH3Q96II8 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LRCH3Q96II8 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
LRCH3Q96II8 ARL6IP5-201ENST00000273258 2101 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LRCH3Q96II8 OR5J1P-201ENST00000313544 939 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
LRCH3Q96II8 PKIB-203ENST00000368446 556 ntTSL 2 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 CISD1P1-201ENST00000393907 327 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 MIR1266-201ENST00000408125 84 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 HMGB1P11-201ENST00000413899 637 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 PIGFP2-201ENST00000421400 651 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 AL645937.1-202ENST00000421799 937 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 DYNLL1P7-201ENST00000429273 258 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 RPL5P25-201ENST00000441148 775 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 MED28P8-201ENST00000454831 521 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 RPL29P23-201ENST00000486188 442 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 RNU6ATAC39P-201ENST00000516309 149 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 RN7SKP40-201ENST00000517211 242 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 PHBP17-201ENST00000528576 541 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LRCH3Q96II8 GTF2IP8-201ENST00000560687 584 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 AC136618.2-201ENST00000575091 400 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 AC011840.5-201ENST00000582125 771 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 UOX-205ENST00000640983 544 ntTSL 4 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LRCH3Q96II8 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LRCH3Q96II8 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LRCH3Q96II8 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
LRCH3Q96II8 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LRCH3Q96II8 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LRCH3Q96II8 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LRCH3Q96II8 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
LRCH3Q96II8 KYNUP1-201ENST00000466683 1406 ntBASIC8.37□□□□□ -1.07
LRCH3Q96II8 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LRCH3Q96II8 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LRCH3Q96II8 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
LRCH3Q96II8 SOCS5P5-201ENST00000402732 1586 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LRCH3Q96II8 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
LRCH3Q96II8 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
LRCH3Q96II8 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LRCH3Q96II8 AP001527.1-201ENST00000566440 1957 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 RNU6-1322P-201ENST00000364309 107 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 RNY4P34-201ENST00000364779 95 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 RNU6-702P-201ENST00000364982 107 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 RNU6-359P-201ENST00000365466 108 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LRCH3Q96II8 RNU6-723P-201ENST00000383973 107 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 AL162578.1-201ENST00000406202 378 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 AL450338.1-201ENST00000407987 512 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 RNU6-195P-201ENST00000411352 109 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 NAP1L1P2-201ENST00000414182 1089 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 AL672212.1-201ENST00000422246 400 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 RPL37P21-201ENST00000435890 276 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 AL135752.1-201ENST00000479477 471 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 RPL7P39-201ENST00000481157 744 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LRCH3Q96II8 Y_RNA.691-201ENST00000516611 103 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms