Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.2□□□□□ -1.58
SCN1BQ07699 RNU4ATAC-201ENST00000580972 127 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SCN1BQ07699 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SCN1BQ07699 AC026898.1-201ENST00000586404 571 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 AC124856.1-201ENST00000600819 896 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 GAPDHP41-201ENST00000613707 975 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 AC003001.2-201ENST00000616294 831 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 AC089999.3-201ENST00000622440 577 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.2□□□□□ -1.58
SCN1BQ07699 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SCN1BQ07699 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.2□□□□□ -1.58
SCN1BQ07699 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.2□□□□□ -1.58
SCN1BQ07699 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
SCN1BQ07699 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SCN1BQ07699 AC008079.2-201ENST00000623543 20396 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SCN1BQ07699 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SCN1BQ07699 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SCN1BQ07699 AC007938.2-201ENST00000604666 2634 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.2□□□□□ -1.58
SCN1BQ07699 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SCN1BQ07699 AC117409.1-201ENST00000470499 1310 ntBASIC5.2□□□□□ -1.58
SCN1BQ07699 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.2□□□□□ -1.58
SCN1BQ07699 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SCN1BQ07699 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.19□□□□□ -1.58
SCN1BQ07699 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SCN1BQ07699 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.19□□□□□ -1.58
SCN1BQ07699 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.19□□□□□ -1.58
SCN1BQ07699 LYARP1-201ENST00000436977 1501 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCN1BQ07699 AC107977.1-201ENST00000355745 939 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 RNA5SP346-201ENST00000363541 121 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SCN1BQ07699 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SCN1BQ07699 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SCN1BQ07699 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCN1BQ07699 RNU6-883P-201ENST00000384597 107 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SCN1BQ07699 AL157702.1-201ENST00000398764 426 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 OR1F12-201ENST00000402365 945 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 PRELID1P1-201ENST00000403549 660 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 AC233289.1-201ENST00000403700 508 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 RN7SKP144-201ENST00000411108 279 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 RANP4-201ENST00000413361 655 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SCN1BQ07699 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SCN1BQ07699 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.19□□□□□ -1.58
SCN1BQ07699 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.19□□□□□ -1.58
SCN1BQ07699 FAM204CP-201ENST00000424489 642 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 MTND4LP14-201ENST00000429447 288 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.19□□□□□ -1.58
SCN1BQ07699 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.19□□□□□ -1.58
SCN1BQ07699 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.19□□□□□ -1.58
SCN1BQ07699 AL645936.1-201ENST00000441979 518 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.19□□□□□ -1.58
SCN1BQ07699 RPS18P1-201ENST00000447840 458 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.19□□□□□ -1.58
SCN1BQ07699 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.19□□□□□ -1.58
SCN1BQ07699 AC002553.2-201ENST00000453217 340 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.19□□□□□ -1.58
SCN1BQ07699 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.19□□□□□ -1.58
SCN1BQ07699 RN7SL393P-201ENST00000463588 296 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.19□□□□□ -1.58
SCN1BQ07699 RPL12P31-201ENST00000478433 450 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.19□□□□□ -1.58
SCN1BQ07699 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.19□□□□□ -1.58
SCN1BQ07699 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SCN1BQ07699 AC090424.1-201ENST00000535243 736 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 AL121594.2-201ENST00000541658 472 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.19□□□□□ -1.58
SCN1BQ07699 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.19□□□□□ -1.58
SCN1BQ07699 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.19□□□□□ -1.58
SCN1BQ07699 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.19□□□□□ -1.58
SCN1BQ07699 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.19□□□□□ -1.58
SCN1BQ07699 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.19□□□□□ -1.58
SCN1BQ07699 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.19□□□□□ -1.58
SCN1BQ07699 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.19□□□□□ -1.58
SCN1BQ07699 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SCN1BQ07699 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.19□□□□□ -1.58
SCN1BQ07699 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCN1BQ07699 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.19□□□□□ -1.58
SCN1BQ07699 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SCN1BQ07699 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SCN1BQ07699 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCN1BQ07699 EIF3EP1-201ENST00000433978 1316 ntBASIC5.19□□□□□ -1.58
SCN1BQ07699 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.19□□□□□ -1.58
SCN1BQ07699 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCN1BQ07699 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.19□□□□□ -1.58
SCN1BQ07699 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.19□□□□□ -1.58
SCN1BQ07699 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SCN1BQ07699 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN1BQ07699 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN1BQ07699 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SCN1BQ07699 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN1BQ07699 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN1BQ07699 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
SCN1BQ07699 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN1BQ07699 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.18□□□□□ -1.58
SCN1BQ07699 ZNF733P-202ENST00000444809 1573 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms