Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.39□□□□□ -1.55
PTPN6P29350 GAPDHP71-201ENST00000511530 1003 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 SNORD116-30-201ENST00000516468 85 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.39□□□□□ -1.55
PTPN6P29350 AC130364.2-201ENST00000528639 604 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.39□□□□□ -1.55
PTPN6P29350 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.39□□□□□ -1.55
PTPN6P29350 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.39□□□□□ -1.55
PTPN6P29350 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.39□□□□□ -1.55
PTPN6P29350 AC027243.2-201ENST00000602530 724 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 AC100767.2-201ENST00000604840 693 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PTPN6P29350 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.39□□□□□ -1.55
PTPN6P29350 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PTPN6P29350 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.39□□□□□ -1.55
PTPN6P29350 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.39□□□□□ -1.55
PTPN6P29350 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.39□□□□□ -1.55
PTPN6P29350 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PTPN6P29350 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTPN6P29350 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.39□□□□□ -1.55
PTPN6P29350 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PTPN6P29350 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.39□□□□□ -1.55
PTPN6P29350 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PTPN6P29350 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PTPN6P29350 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTPN6P29350 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PTPN6P29350 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.39□□□□□ -1.55
PTPN6P29350 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PTPN6P29350 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PTPN6P29350 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PTPN6P29350 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PTPN6P29350 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTPN6P29350 AC018809.2-201ENST00000602436 3823 ntBASIC5.38□□□□□ -1.55
PTPN6P29350 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTPN6P29350 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.38□□□□□ -1.55
PTPN6P29350 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PTPN6P29350 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PTPN6P29350 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PTPN6P29350 OR52B3P-201ENST00000314715 928 ntBASIC5.38□□□□□ -1.55
PTPN6P29350 AL121886.1-201ENST00000358609 435 ntBASIC5.38□□□□□ -1.55
PTPN6P29350 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTPN6P29350 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PTPN6P29350 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PTPN6P29350 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PTPN6P29350 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
PTPN6P29350 NIFKP3-201ENST00000417799 865 ntBASIC5.38□□□□□ -1.55
PTPN6P29350 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.38□□□□□ -1.55
PTPN6P29350 LINC02210-201ENST00000444561 288 ntBASIC5.38□□□□□ -1.55
PTPN6P29350 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.38□□□□□ -1.55
PTPN6P29350 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.38□□□□□ -1.55
PTPN6P29350 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.38□□□□□ -1.55
PTPN6P29350 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.38□□□□□ -1.55
PTPN6P29350 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.38□□□□□ -1.55
PTPN6P29350 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.38□□□□□ -1.55
PTPN6P29350 RN7SKP34-201ENST00000516142 244 ntBASIC5.38□□□□□ -1.55
PTPN6P29350 RN7SKP253-201ENST00000516424 309 ntBASIC5.38□□□□□ -1.55
PTPN6P29350 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.38□□□□□ -1.55
PTPN6P29350 AP000859.1-201ENST00000525536 307 ntBASIC5.38□□□□□ -1.55
PTPN6P29350 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.38□□□□□ -1.55
PTPN6P29350 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.38□□□□□ -1.55
PTPN6P29350 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.38□□□□□ -1.55
PTPN6P29350 COX6CP7-201ENST00000597056 208 ntBASIC5.38□□□□□ -1.55
PTPN6P29350 NF1P10-201ENST00000613227 742 ntBASIC5.38□□□□□ -1.55
PTPN6P29350 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.38□□□□□ -1.55
PTPN6P29350 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.38□□□□□ -1.55
PTPN6P29350 AC008691.1-209ENST00000642094 814 ntBASIC5.38□□□□□ -1.55
PTPN6P29350 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PTPN6P29350 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.38□□□□□ -1.55
PTPN6P29350 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.38□□□□□ -1.55
PTPN6P29350 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PTPN6P29350 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.38□□□□□ -1.55
PTPN6P29350 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTPN6P29350 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTPN6P29350 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.38□□□□□ -1.55
PTPN6P29350 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTPN6P29350 AC107021.2-201ENST00000567714 2095 ntBASIC5.38□□□□□ -1.55
PTPN6P29350 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PTPN6P29350 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTPN6P29350 AC091305.2-201ENST00000624049 1576 ntBASIC5.38□□□□□ -1.55
PTPN6P29350 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.37□□□□□ -1.55
PTPN6P29350 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTPN6P29350 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTPN6P29350 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.37□□□□□ -1.55
PTPN6P29350 GAPDHP15-201ENST00000398586 975 ntBASIC5.37□□□□□ -1.55
PTPN6P29350 NPM1P37-201ENST00000403105 874 ntBASIC5.37□□□□□ -1.55
PTPN6P29350 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.37□□□□□ -1.55
PTPN6P29350 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.37□□□□□ -1.55
PTPN6P29350 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PTPN6P29350 RNF10P1-201ENST00000418589 369 ntBASIC5.37□□□□□ -1.55
PTPN6P29350 NAP1L4P2-201ENST00000425958 899 ntBASIC5.37□□□□□ -1.55
PTPN6P29350 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.37□□□□□ -1.55
PTPN6P29350 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.37□□□□□ -1.55
PTPN6P29350 AL512637.1-201ENST00000439523 1231 ntBASIC5.37□□□□□ -1.55
PTPN6P29350 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.37□□□□□ -1.55
PTPN6P29350 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.37□□□□□ -1.55
PTPN6P29350 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTPN6P29350 AP006222.1-205ENST00000450734 457 ntBASIC5.37□□□□□ -1.55
PTPN6P29350 MEMO1P4-201ENST00000453590 386 ntBASIC5.37□□□□□ -1.55
PTPN6P29350 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTPN6P29350 RPS17P15-201ENST00000475609 349 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms