Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MAPK10-263ENST00000641052 4307 ntBASIC9.25□□□□□ -0.93
TOP2AP11388 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC9.25□□□□□ -0.93
TOP2AP11388 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC9.25□□□□□ -0.93
TOP2AP11388 AC126755.2-208ENST00000327792 462 ntBASIC9.25□□□□□ -0.93
TOP2AP11388 AC138969.1-213ENST00000331436 462 ntBASIC9.25□□□□□ -0.93
TOP2AP11388 ADIG-201ENST00000373348 430 ntTSL 2 BASIC9.25□□□□□ -0.93
TOP2AP11388 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TOP2AP11388 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TOP2AP11388 GJA6P-201ENST00000415117 1042 ntBASIC9.25□□□□□ -0.93
TOP2AP11388 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC9.25□□□□□ -0.93
TOP2AP11388 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC9.25□□□□□ -0.93
TOP2AP11388 AC073264.2-201ENST00000448886 166 ntBASIC9.25□□□□□ -0.93
TOP2AP11388 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC9.25□□□□□ -0.93
TOP2AP11388 COX6B1P5-201ENST00000509843 249 ntBASIC9.25□□□□□ -0.93
TOP2AP11388 GCSHP4-201ENST00000538792 439 ntBASIC9.25□□□□□ -0.93
TOP2AP11388 MIR5096-201ENST00000583713 70 ntBASIC9.25□□□□□ -0.93
TOP2AP11388 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC9.24□□□□□ -0.93
TOP2AP11388 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
TOP2AP11388 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TOP2AP11388 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
TOP2AP11388 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TOP2AP11388 UG0898H09-202ENST00000623646 7040 ntBASIC9.24□□□□□ -0.93
TOP2AP11388 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
TOP2AP11388 CHEK2P3-201ENST00000416118 248 ntBASIC9.24□□□□□ -0.93
TOP2AP11388 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC9.24□□□□□ -0.93
TOP2AP11388 AL590399.4-201ENST00000436561 601 ntBASIC9.24□□□□□ -0.93
TOP2AP11388 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC9.24□□□□□ -0.93
TOP2AP11388 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC9.24□□□□□ -0.93
TOP2AP11388 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC9.24□□□□□ -0.93
TOP2AP11388 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC9.24□□□□□ -0.93
TOP2AP11388 AC006427.1-201ENST00000514359 712 ntBASIC9.24□□□□□ -0.93
TOP2AP11388 AP003400.3-201ENST00000624904 346 ntBASIC9.24□□□□□ -0.93
TOP2AP11388 AL596275.2-208ENST00000641192 594 ntBASIC9.24□□□□□ -0.93
TOP2AP11388 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TOP2AP11388 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TOP2AP11388 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TOP2AP11388 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC9.23□□□□□ -0.93
TOP2AP11388 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TOP2AP11388 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
TOP2AP11388 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC9.23□□□□□ -0.93
TOP2AP11388 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TOP2AP11388 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
TOP2AP11388 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TOP2AP11388 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
TOP2AP11388 AL672167.3-201ENST00000465951 960 ntBASIC9.23□□□□□ -0.93
TOP2AP11388 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC9.23□□□□□ -0.93
TOP2AP11388 AC012557.1-201ENST00000607115 611 ntBASIC9.23□□□□□ -0.93
TOP2AP11388 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
TOP2AP11388 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
TOP2AP11388 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TOP2AP11388 AC104162.1-201ENST00000430831 2382 ntBASIC9.23□□□□□ -0.93
TOP2AP11388 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC9.23□□□□□ -0.93
TOP2AP11388 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
TOP2AP11388 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC9.23□□□□□ -0.93
TOP2AP11388 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TOP2AP11388 NLRP3P1-201ENST00000622303 1785 ntBASIC9.22□□□□□ -0.93
TOP2AP11388 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TOP2AP11388 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC9.22□□□□□ -0.93
TOP2AP11388 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TOP2AP11388 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC9.22□□□□□ -0.93
TOP2AP11388 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC9.22□□□□□ -0.93
TOP2AP11388 RNA5SP90-201ENST00000364801 99 ntBASIC9.22□□□□□ -0.93
TOP2AP11388 RNU6-398P-201ENST00000384143 109 ntBASIC9.22□□□□□ -0.93
TOP2AP11388 AP002530.1-201ENST00000405705 684 ntBASIC9.22□□□□□ -0.93
TOP2AP11388 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC9.22□□□□□ -0.93
TOP2AP11388 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC9.22□□□□□ -0.93
TOP2AP11388 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC9.22□□□□□ -0.93
TOP2AP11388 OR7E128P-201ENST00000532736 1024 ntBASIC9.22□□□□□ -0.93
TOP2AP11388 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TOP2AP11388 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
TOP2AP11388 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC9.22□□□□□ -0.93
TOP2AP11388 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TOP2AP11388 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
TOP2AP11388 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC9.22□□□□□ -0.93
TOP2AP11388 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
TOP2AP11388 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC9.22□□□□□ -0.93
TOP2AP11388 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TOP2AP11388 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC9.21□□□□□ -0.93
TOP2AP11388 AC010132.2-201ENST00000295493 1043 ntBASIC9.21□□□□□ -0.93
TOP2AP11388 RN7SKP100-201ENST00000411258 284 ntBASIC9.21□□□□□ -0.93
TOP2AP11388 NPM1P40-201ENST00000412758 733 ntBASIC9.21□□□□□ -0.93
TOP2AP11388 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
TOP2AP11388 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC9.21□□□□□ -0.93
TOP2AP11388 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC9.21□□□□□ -0.93
TOP2AP11388 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC9.21□□□□□ -0.93
TOP2AP11388 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC9.21□□□□□ -0.93
TOP2AP11388 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC9.21□□□□□ -0.93
TOP2AP11388 AC140172.1-201ENST00000502928 141 ntBASIC9.21□□□□□ -0.93
TOP2AP11388 MIR4270-201ENST00000581799 70 ntBASIC9.21□□□□□ -0.93
TOP2AP11388 AC108738.1-201ENST00000603703 237 ntBASIC9.21□□□□□ -0.93
TOP2AP11388 AC009027.1-201ENST00000604510 479 ntBASIC9.21□□□□□ -0.93
TOP2AP11388 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TOP2AP11388 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TOP2AP11388 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
TOP2AP11388 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
TOP2AP11388 LCOR-201ENST00000286067 4542 ntBASIC9.21□□□□□ -0.93
TOP2AP11388 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
TOP2AP11388 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
TOP2AP11388 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
TOP2AP11388 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms