Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC7.05□□□□□ -1.28
COL5A2P05997 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
COL5A2P05997 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.05□□□□□ -1.28
COL5A2P05997 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL5A2P05997 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL5A2P05997 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
COL5A2P05997 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.05□□□□□ -1.28
COL5A2P05997 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL5A2P05997 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL5A2P05997 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.05□□□□□ -1.28
COL5A2P05997 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL5A2P05997 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL5A2P05997 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL5A2P05997 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
COL5A2P05997 AL356967.1-201ENST00000406305 431 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 NPM1P40-201ENST00000412758 733 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.04□□□□□ -1.28
COL5A2P05997 RPS4XP16-201ENST00000427198 791 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 AL590399.4-201ENST00000436561 601 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 AC073072.2-201ENST00000447425 348 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 AC073264.2-201ENST00000448886 166 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC7.04□□□□□ -1.28
COL5A2P05997 PDCL3P4-201ENST00000489621 720 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 KRTAP5-14P-201ENST00000502328 121 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.04□□□□□ -1.28
COL5A2P05997 OR5AN2P-201ENST00000534535 896 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC7.04□□□□□ -1.28
COL5A2P05997 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC7.04□□□□□ -1.28
COL5A2P05997 MEMO1P5-201ENST00000604810 406 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 AL023583.1-201ENST00000607518 1143 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 MTCO1P1-201ENST00000624263 1081 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.04□□□□□ -1.28
COL5A2P05997 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
COL5A2P05997 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
COL5A2P05997 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL5A2P05997 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL5A2P05997 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL5A2P05997 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC7.04□□□□□ -1.28
COL5A2P05997 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
COL5A2P05997 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL5A2P05997 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL5A2P05997 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL5A2P05997 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
COL5A2P05997 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.04□□□□□ -1.28
COL5A2P05997 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
COL5A2P05997 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL5A2P05997 GAPDHP15-201ENST00000398586 975 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 MIR1182-201ENST00000408363 97 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 CHEK2P3-201ENST00000416118 248 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 C4BPAP2-201ENST00000428434 478 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 RPL7P56-201ENST00000429441 717 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 KNOP1P3-201ENST00000446933 426 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 UBE2FP2-201ENST00000566646 462 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 AC011487.3-201ENST00000593607 453 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.04□□□□□ -1.28
COL5A2P05997 AL589935.2-201ENST00000616471 1231 ntBASIC7.04□□□□□ -1.28
COL5A2P05997 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL5A2P05997 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL5A2P05997 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
COL5A2P05997 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL5A2P05997 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL5A2P05997 AC011933.2-201ENST00000578539 2790 ntBASIC7.03□□□□□ -1.28
COL5A2P05997 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL5A2P05997 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL5A2P05997 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL5A2P05997 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
COL5A2P05997 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC7.03□□□□□ -1.28
COL5A2P05997 AC083899.1-201ENST00000454465 3819 ntBASIC7.03□□□□□ -1.28
COL5A2P05997 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL5A2P05997 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
COL5A2P05997 PRNCR1-201ENST00000635449 12727 ntBASIC7.03□□□□□ -1.28
COL5A2P05997 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL5A2P05997 AC144833.1-201ENST00000567953 4089 ntBASIC7.03□□□□□ -1.28
COL5A2P05997 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL5A2P05997 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
COL5A2P05997 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
COL5A2P05997 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC7.03□□□□□ -1.28
COL5A2P05997 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC7.03□□□□□ -1.28
COL5A2P05997 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC7.03□□□□□ -1.28
COL5A2P05997 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.03□□□□□ -1.28
COL5A2P05997 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.03□□□□□ -1.28
COL5A2P05997 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL5A2P05997 AC083809.1-201ENST00000615051 472 ntBASIC7.03□□□□□ -1.28
COL5A2P05997 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC7.03□□□□□ -1.28
COL5A2P05997 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL5A2P05997 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL5A2P05997 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.03□□□□□ -1.28
COL5A2P05997 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.02□□□□□ -1.29
COL5A2P05997 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
COL5A2P05997 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.02□□□□□ -1.29
COL5A2P05997 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL5A2P05997 API5-210ENST00000534600 1760 ntTSL 5 BASIC7.02□□□□□ -1.29
COL5A2P05997 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL5A2P05997 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL5A2P05997 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL5A2P05997 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL5A2P05997 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
COL5A2P05997 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
COL5A2P05997 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL5A2P05997 SNORD56.6-201ENST00000384569 71 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms