Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
SOX1O00570 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.23□□□□□ -1.25
SOX1O00570 AL353763.2-201ENST00000623489 1903 ntBASIC7.23□□□□□ -1.25
SOX1O00570 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC7.23□□□□□ -1.25
SOX1O00570 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC7.23□□□□□ -1.25
SOX1O00570 TNFSF15-201ENST00000374044 2789 ntBASIC7.23□□□□□ -1.25
SOX1O00570 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.23□□□□□ -1.25
SOX1O00570 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 RNU6-560P-201ENST00000364007 108 ntBASIC7.23□□□□□ -1.25
SOX1O00570 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 PPIAP26-201ENST00000377951 522 ntBASIC7.23□□□□□ -1.25
SOX1O00570 SNORA11-201ENST00000408789 128 ntBASIC7.23□□□□□ -1.25
SOX1O00570 AC017035.1-201ENST00000411999 1115 ntBASIC7.23□□□□□ -1.25
SOX1O00570 AC023128.2-201ENST00000420880 1223 ntBASIC7.23□□□□□ -1.25
SOX1O00570 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC7.23□□□□□ -1.25
SOX1O00570 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 AL355433.1-201ENST00000422804 300 ntBASIC7.23□□□□□ -1.25
SOX1O00570 AL139421.1-201ENST00000423010 169 ntBASIC7.23□□□□□ -1.25
SOX1O00570 RPL7AP14-201ENST00000424041 802 ntBASIC7.23□□□□□ -1.25
SOX1O00570 MED14P1-201ENST00000430517 648 ntBASIC7.23□□□□□ -1.25
SOX1O00570 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.23□□□□□ -1.25
SOX1O00570 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.23□□□□□ -1.25
SOX1O00570 EMC3-AS1-205ENST00000438698 534 ntBASIC7.23□□□□□ -1.25
SOX1O00570 AP000281.1-201ENST00000444036 316 ntBASIC7.23□□□□□ -1.25
SOX1O00570 FGF7P6-202ENST00000451282 293 ntBASIC7.23□□□□□ -1.25
SOX1O00570 MTND2P24-201ENST00000453434 806 ntBASIC7.23□□□□□ -1.25
SOX1O00570 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
SOX1O00570 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.23□□□□□ -1.25
SOX1O00570 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
SOX1O00570 AC104971.1-201ENST00000495117 578 ntBASIC7.23□□□□□ -1.25
SOX1O00570 AC231760.1-201ENST00000498002 260 ntBASIC7.23□□□□□ -1.25
SOX1O00570 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 BNIP3P41-201ENST00000503774 571 ntBASIC7.23□□□□□ -1.25
SOX1O00570 AC093281.2-201ENST00000510153 597 ntBASIC7.23□□□□□ -1.25
SOX1O00570 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC7.23□□□□□ -1.25
SOX1O00570 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC7.23□□□□□ -1.25
SOX1O00570 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.23□□□□□ -1.25
SOX1O00570 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.23□□□□□ -1.25
SOX1O00570 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC7.23□□□□□ -1.25
SOX1O00570 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.23□□□□□ -1.25
SOX1O00570 RPL3P13-201ENST00000550415 216 ntBASIC7.23□□□□□ -1.25
SOX1O00570 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC7.23□□□□□ -1.25
SOX1O00570 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC7.23□□□□□ -1.25
SOX1O00570 AC044860.2-201ENST00000561005 179 ntBASIC7.23□□□□□ -1.25
SOX1O00570 AC012435.1-202ENST00000568772 240 ntBASIC7.23□□□□□ -1.25
SOX1O00570 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.23□□□□□ -1.25
SOX1O00570 ROCK1P1-201ENST00000573767 549 ntBASIC7.23□□□□□ -1.25
SOX1O00570 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC7.23□□□□□ -1.25
SOX1O00570 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.23□□□□□ -1.25
SOX1O00570 ABBA01006766.1-201ENST00000584728 294 ntBASIC7.23□□□□□ -1.25
SOX1O00570 AC009237.13-201ENST00000603193 276 ntBASIC7.23□□□□□ -1.25
SOX1O00570 LSM1P2-201ENST00000604911 322 ntBASIC7.23□□□□□ -1.25
SOX1O00570 AC090186.1-201ENST00000605991 572 ntBASIC7.23□□□□□ -1.25
SOX1O00570 AC091946.2-201ENST00000606105 291 ntBASIC7.23□□□□□ -1.25
SOX1O00570 AP001330.5-201ENST00000607176 411 ntBASIC7.23□□□□□ -1.25
SOX1O00570 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC7.23□□□□□ -1.25
SOX1O00570 RNA5SP440-201ENST00000612665 119 ntBASIC7.23□□□□□ -1.25
SOX1O00570 RN7SL787P-201ENST00000613000 284 ntBASIC7.23□□□□□ -1.25
SOX1O00570 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.23□□□□□ -1.25
SOX1O00570 AC127502.3-201ENST00000636170 1206 ntBASIC7.23□□□□□ -1.25
SOX1O00570 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
SOX1O00570 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
SOX1O00570 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.23□□□□□ -1.25
SOX1O00570 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 AL355852.1-201ENST00000454081 1771 ntBASIC7.23□□□□□ -1.25
SOX1O00570 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC7.22□□□□□ -1.25
SOX1O00570 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.22□□□□□ -1.25
SOX1O00570 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC7.22□□□□□ -1.25
SOX1O00570 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC7.22□□□□□ -1.25
SOX1O00570 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.22□□□□□ -1.25
SOX1O00570 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 PPIAP22-201ENST00000358455 498 ntBASIC7.22□□□□□ -1.25
SOX1O00570 RNA5SP477-201ENST00000362639 119 ntBASIC7.22□□□□□ -1.25
SOX1O00570 snoZ40.1-201ENST00000364540 72 ntBASIC7.22□□□□□ -1.25
SOX1O00570 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 RNU6-549P-201ENST00000384433 107 ntBASIC7.22□□□□□ -1.25
SOX1O00570 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SOX1O00570 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.22□□□□□ -1.25
SOX1O00570 AL139805.1-201ENST00000407837 289 ntBASIC7.22□□□□□ -1.25
SOX1O00570 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 RN7SKP33-201ENST00000410942 340 ntBASIC7.22□□□□□ -1.25
SOX1O00570 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms