Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC004825.1-201ENST00000555068 586 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC110588.1-201ENST00000559699 137 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 RBM4-213ENST00000578778 582 ntTSL 4 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC061975.3-201ENST00000583209 244 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 7SK.7-201ENST00000603504 247 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC8.83□□□□□ -1
HPS5Q9UPZ3 RN7SL778P-201ENST00000607160 297 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AL136295.6-201ENST00000610486 658 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC006335.3-201ENST00000613408 292 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC073488.7-201ENST00000633785 778 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC119674.1-207ENST00000641355 633 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.83□□□□□ -1
HPS5Q9UPZ3 CR383658.2-201ENST00000547576 1525 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 HSPA8P17-201ENST00000427029 1382 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.83□□□□□ -1
HPS5Q9UPZ3 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HPS5Q9UPZ3 IARS-205ENST00000443024 4341 ntTSL 5 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
HPS5Q9UPZ3 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
HPS5Q9UPZ3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
HPS5Q9UPZ3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HPS5Q9UPZ3 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC8.83□□□□□ -1
HPS5Q9UPZ3 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 DCAF13P1-201ENST00000495256 1330 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 AP005901.5-201ENST00000545779 1796 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 Y_RNA.296-201ENST00000364930 108 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 AL773545.3-201ENST00000414297 706 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 VN1R20P-201ENST00000425215 966 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 ANXA2P2-201ENST00000435128 1020 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 DNAJA1P6-201ENST00000437347 354 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 RPEP4-201ENST00000437636 602 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 EMC3-AS1-205ENST00000438698 534 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 AL022238.1-201ENST00000442557 355 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 AL513533.1-201ENST00000453728 415 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 RN7SL153P-201ENST00000486501 292 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 AC022447.3-201ENST00000506865 495 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 AP005597.4-201ENST00000526762 229 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 MIR3913-1-201ENST00000577744 102 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 RN7SL178P-201ENST00000582930 304 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 AL139286.1-201ENST00000604465 483 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 RN7SL680P-201ENST00000620379 299 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 AL132796.3-201ENST00000624703 900 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC8.82□□□□□ -1
HPS5Q9UPZ3 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 DPY19L1P1-201ENST00000417811 2594 ntBASIC8.82□□□□□ -1
HPS5Q9UPZ3 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC8.82□□□□□ -1
HPS5Q9UPZ3 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HPS5Q9UPZ3 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC8.81□□□□□ -1
HPS5Q9UPZ3 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.81□□□□□ -1
HPS5Q9UPZ3 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HPS5Q9UPZ3 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.81□□□□□ -1
HPS5Q9UPZ3 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.81□□□□□ -1
HPS5Q9UPZ3 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
HPS5Q9UPZ3 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.81□□□□□ -1
HPS5Q9UPZ3 AL359694.2-201ENST00000567753 1615 ntBASIC8.81□□□□□ -1
HPS5Q9UPZ3 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
HPS5Q9UPZ3 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC8.81□□□□□ -1
HPS5Q9UPZ3 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HPS5Q9UPZ3 RNU6-845P-201ENST00000362578 103 ntBASIC8.81□□□□□ -1
HPS5Q9UPZ3 Y_RNA.72-201ENST00000362894 103 ntBASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms