Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 C17orf80-205ENST00000535032 2129 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
LHX6Q9UPM6 CDH26-202ENST00000348616 3182 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
LHX6Q9UPM6 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC8.15□□□□□ -1.11
LHX6Q9UPM6 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.15□□□□□ -1.11
LHX6Q9UPM6 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.15□□□□□ -1.11
LHX6Q9UPM6 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.11
LHX6Q9UPM6 AL731566.1-201ENST00000620490 1937 ntBASIC8.15□□□□□ -1.11
LHX6Q9UPM6 SRP19-204ENST00000505459 2841 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
LHX6Q9UPM6 KDM4C-202ENST00000381309 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
LHX6Q9UPM6 CARD8-216ENST00000520153 2617 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
LHX6Q9UPM6 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
LHX6Q9UPM6 BTN2A3P-204ENST00000466808 2559 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
LHX6Q9UPM6 ZNF35-201ENST00000296092 2503 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AC010643.1-201ENST00000599433 3263 ntTSL 2 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 SSR3-201ENST00000265044 3716 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 CAST-244ENST00000515663 1473 ntTSL 2 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 DENND2A-208ENST00000492720 3614 ntTSL 5 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 OTOA-201ENST00000286149 3471 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 OR7E122P-202ENST00000641144 6171 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AC092132.2-201ENST00000611227 2744 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AL445665.1-201ENST00000322495 2599 ntTSL 2 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 RNU6-713P-201ENST00000384761 107 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 RNU6-101P-201ENST00000410323 104 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 RN7SKP89-201ENST00000410774 242 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 RPL12P10-201ENST00000413498 498 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AL451074.5-201ENST00000415894 435 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AC114814.2-201ENST00000419195 485 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 LINC01399-201ENST00000423311 648 ntTSL 3 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 RSL24D1P6-201ENST00000426934 401 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AC006548.1-201ENST00000427470 102 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AL132765.1-201ENST00000434165 553 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 TRAPPC2P3-201ENST00000443200 321 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 OR1H1P-201ENST00000448731 937 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 TXNP3-201ENST00000454560 301 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 RBMY2EP-202ENST00000456360 940 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 RPL12P40-201ENST00000467028 488 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 MYADML-203ENST00000491596 951 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 RPS27P27-201ENST00000498779 255 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 Y_RNA.703-201ENST00000516846 111 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AP005435.4-201ENST00000529514 284 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 MIR1273F-201ENST00000580581 99 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AP005119.1-201ENST00000580956 292 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AC098848.2-201ENST00000588023 330 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AC243960.5-201ENST00000597858 255 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AC078899.3-201ENST00000599065 212 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AC093063.1-201ENST00000599317 363 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AC091953.5-201ENST00000622919 233 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 USP2-AS1-201ENST00000498979 2486 ntTSL 3 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 CALD1-202ENST00000361901 4114 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 PFKM-210ENST00000547587 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 LINC00939-202ENST00000507313 2819 ntTSL 2 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 ZP2-204ENST00000574091 2241 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AKAP13-217ENST00000560302 3765 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 STEAP3-AS1-201ENST00000454260 3218 ntTSL 2 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 KCNA2-215ENST00000640956 1584 ntTSL 5 BASIC8.14□□□□□ -1.11
LHX6Q9UPM6 AC021491.4-201ENST00000620769 2573 ntBASIC8.14□□□□□ -1.11
LHX6Q9UPM6 ALDH7A1-227ENST00000636879 2501 ntTSL 5 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 LDB2-202ENST00000441778 2476 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 CERS3-201ENST00000284382 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AC025580.2-204ENST00000560077 2399 ntTSL 5 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 RBBP9-201ENST00000337227 3861 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 Y_RNA.150-201ENST00000363562 102 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 RNU4-1-201ENST00000363925 141 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 SNORA75B-201ENST00000384053 137 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 Y_RNA.461-201ENST00000384263 103 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms