Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AC099670.1-201ENST00000455141 783 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 RPL23AP37-201ENST00000479658 549 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 BET1P1-201ENST00000482276 359 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 RPS3AP22-201ENST00000488297 769 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AC091951.3-201ENST00000504093 246 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 HPRT1P2-201ENST00000505250 544 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AC104108.1-201ENST00000509930 412 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 RNU5A-4P-201ENST00000516588 111 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 GCSHP4-201ENST00000538792 439 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AC025260.1-201ENST00000548858 430 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AC109446.2-201ENST00000567872 497 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AP002884.5-201ENST00000595053 1132 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AL133507.1-201ENST00000605269 557 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AP001264.1-201ENST00000620602 703 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AC131159.1-201ENST00000621854 213 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AC004943.3-201ENST00000624116 600 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 MIR1322-201ENST00000638013 71 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 ZNF663P-202ENST00000641770 1131 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AKAP17BP-201ENST00000431706 2719 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 AC073365.1-203ENST00000641055 1992 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 CASC19-228ENST00000641414 1684 ntBASIC6.49□□□□□ -1.37
TRIM39Q9HCM9 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AC023245.2-201ENST00000530760 2978 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 OR5H2-201ENST00000355273 945 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 RNU1-87P-201ENST00000363727 170 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 RNU1-46P-201ENST00000384425 164 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 RN7SKP146-201ENST00000410242 334 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 MRPS21P5-201ENST00000417885 231 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 ELOCP9-201ENST00000418624 239 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 GPN3P1-201ENST00000423883 535 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 RPF2P1-201ENST00000424137 906 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 MRPS21P3-201ENST00000436696 262 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AC013403.1-201ENST00000436954 263 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 RPSAP40-201ENST00000442343 891 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 RN7SL836P-201ENST00000476140 296 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 RPL9P15-201ENST00000491096 532 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AC093664.1-201ENST00000511779 289 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 RN7SKP248-201ENST00000516278 305 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AC037479.1-201ENST00000558361 625 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AL354943.1-201ENST00000572103 781 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 SYPL1P2-201ENST00000582878 727 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 PIGPP4-201ENST00000584447 307 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AP001542.2-201ENST00000593141 364 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms