Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNU5D-1-201ENST00000363299 116 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 RNA5SP260-201ENST00000363849 111 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 RNU6-1106P-201ENST00000390845 107 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 RNU2-42P-201ENST00000410697 113 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 RPL7AP51-201ENST00000422016 760 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 GAPDHP73-201ENST00000423411 1007 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 ANXA2P2-201ENST00000435128 1020 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 MTND6P13-201ENST00000443510 523 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 AC097499.1-201ENST00000444277 208 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 RPS24P6-201ENST00000452670 400 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 U8.20-201ENST00000459445 131 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 RPL36AP51-201ENST00000487216 318 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 DYNLL1P6-201ENST00000503440 264 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 AC010587.1-201ENST00000505809 469 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 AC108064.1-201ENST00000513791 460 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 RNU6-406P-201ENST00000516470 107 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 AC100823.2-201ENST00000518337 699 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 ASB8-207ENST00000536953 923 ntTSL 2 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 AC005668.1-201ENST00000571142 476 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 TUG1_3.1-201ENST00000616187 237 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 U4.1-201ENST00000620349 87 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LRCH3Q96II8 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
LRCH3Q96II8 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LRCH3Q96II8 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
LRCH3Q96II8 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 GBP7-201ENST00000294671 2454 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LRCH3Q96II8 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LRCH3Q96II8 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LRCH3Q96II8 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LRCH3Q96II8 OR7A17-203ENST00000642123 3565 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LRCH3Q96II8 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LRCH3Q96II8 OR7E122P-202ENST00000641144 6171 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LRCH3Q96II8 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
LRCH3Q96II8 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LRCH3Q96II8 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LRCH3Q96II8 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LRCH3Q96II8 MIR142-201ENST00000384835 87 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 AL080285.1-201ENST00000404225 984 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 MIR548I3-201ENST00000408378 149 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 MIR548I1-201ENST00000408810 149 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 GAPDHP49-201ENST00000421421 961 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 SEPT14P3-201ENST00000439401 183 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 AL031681.1-201ENST00000443304 400 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 GTF2F2P2-201ENST00000445825 721 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 AL732372.2-207ENST00000445840 183 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 HMGN1P36-201ENST00000446623 298 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 SEPT14P2-201ENST00000453405 183 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 RPSAP39-201ENST00000467439 883 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LRCH3Q96II8 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 AC112206.3-201ENST00000514578 389 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 MINOS1P4-201ENST00000515470 318 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 AP005902.1-201ENST00000521358 186 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LRCH3Q96II8 FO082796.1-201ENST00000523795 183 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 AC087257.2-201ENST00000538759 928 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LRCH3Q96II8 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 RPS7P1-201ENST00000571702 585 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 AL390838.2-201ENST00000602394 274 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 BMS1P7-201ENST00000602440 1052 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 AL358335.3-201ENST00000604678 327 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 AL080274.1-201ENST00000605565 220 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 AC016405.2-201ENST00000607393 312 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 AC068722.2-201ENST00000618734 544 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 MIR6823-201ENST00000622118 61 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 AC040168.1-201ENST00000623594 991 ntBASIC8.38□□□□□ -1.07
LRCH3Q96II8 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC8.38□□□□□ -1.07
LRCH3Q96II8 AC012557.3-201ENST00000626439 255 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms