Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC090236.2-201ENST00000587933 1101 ntBASIC5.29□□□□□ -1.56
CDH11P55287 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH11P55287 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CDH11P55287 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.29□□□□□ -1.56
CDH11P55287 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH11P55287 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH11P55287 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH11P55287 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH11P55287 AC073488.3-201ENST00000631611 778 ntBASIC5.29□□□□□ -1.56
CDH11P55287 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH11P55287 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH11P55287 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH11P55287 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH11P55287 RBMY1HP-201ENST00000382759 1389 ntBASIC5.29□□□□□ -1.56
CDH11P55287 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH11P55287 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH11P55287 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH11P55287 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH11P55287 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CDH11P55287 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH11P55287 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH11P55287 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH11P55287 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH11P55287 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CDH11P55287 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDH11P55287 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH11P55287 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH11P55287 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH11P55287 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH11P55287 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH11P55287 NAP1L4P2-201ENST00000425958 899 ntBASIC5.28□□□□□ -1.56
CDH11P55287 AL392003.1-201ENST00000434394 243 ntBASIC5.28□□□□□ -1.56
CDH11P55287 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH11P55287 MTND2P40-201ENST00000436718 841 ntBASIC5.28□□□□□ -1.56
CDH11P55287 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH11P55287 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH11P55287 AC023271.1-201ENST00000445936 1090 ntBASIC5.28□□□□□ -1.56
CDH11P55287 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH11P55287 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH11P55287 RNU1-88P-201ENST00000459274 128 ntBASIC5.28□□□□□ -1.56
CDH11P55287 RPL37AP8-201ENST00000494116 276 ntBASIC5.28□□□□□ -1.56
CDH11P55287 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH11P55287 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH11P55287 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH11P55287 SCARNA18.1-201ENST00000516330 83 ntBASIC5.28□□□□□ -1.56
CDH11P55287 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH11P55287 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH11P55287 GTF2IP11-201ENST00000526931 420 ntBASIC5.28□□□□□ -1.56
CDH11P55287 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH11P55287 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH11P55287 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH11P55287 NANOGNBP2-201ENST00000544753 553 ntBASIC5.28□□□□□ -1.56
CDH11P55287 AC068305.2-201ENST00000550567 1205 ntBASIC5.28□□□□□ -1.56
CDH11P55287 AC012414.2-201ENST00000559474 187 ntBASIC5.28□□□□□ -1.56
CDH11P55287 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH11P55287 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH11P55287 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH11P55287 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH11P55287 AC092474.3-201ENST00000603022 568 ntBASIC5.28□□□□□ -1.56
CDH11P55287 AC002069.2-201ENST00000603580 883 ntBASIC5.28□□□□□ -1.56
CDH11P55287 AC100767.2-201ENST00000604840 693 ntBASIC5.28□□□□□ -1.56
CDH11P55287 AL590410.1-201ENST00000617925 333 ntBASIC5.28□□□□□ -1.56
CDH11P55287 AC026124.2-201ENST00000621847 656 ntBASIC5.28□□□□□ -1.56
CDH11P55287 AC129915.3-201ENST00000634128 948 ntBASIC5.28□□□□□ -1.56
CDH11P55287 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH11P55287 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDH11P55287 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDH11P55287 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH11P55287 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
CDH11P55287 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH11P55287 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH11P55287 AL132656.3-201ENST00000606384 1595 ntBASIC5.28□□□□□ -1.56
CDH11P55287 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CDH11P55287 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH11P55287 AC015689.2-201ENST00000528172 1738 ntBASIC5.28□□□□□ -1.56
CDH11P55287 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.28□□□□□ -1.56
CDH11P55287 ADAM24P-201ENST00000398655 2101 ntBASIC5.27□□□□□ -1.57
CDH11P55287 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH11P55287 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH11P55287 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH11P55287 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH11P55287 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH11P55287 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH11P55287 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH11P55287 MIR133A2-201ENST00000347538 102 ntBASIC5.27□□□□□ -1.57
CDH11P55287 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH11P55287 RNA5SP477-201ENST00000362639 119 ntBASIC5.27□□□□□ -1.57
CDH11P55287 RN7SKP78-201ENST00000364711 318 ntBASIC5.27□□□□□ -1.57
CDH11P55287 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH11P55287 RNA5SP91-201ENST00000390902 119 ntBASIC5.27□□□□□ -1.57
CDH11P55287 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH11P55287 SNRPEP6-201ENST00000407465 277 ntBASIC5.27□□□□□ -1.57
CDH11P55287 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH11P55287 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH11P55287 AC017078.1-201ENST00000416146 368 ntBASIC5.27□□□□□ -1.57
CDH11P55287 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH11P55287 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH11P55287 AL390879.2-203ENST00000426943 1121 ntBASIC5.27□□□□□ -1.57
CDH11P55287 RPS27AP6-201ENST00000427962 448 ntBASIC5.27□□□□□ -1.57
CDH11P55287 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms