Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF144AP50876 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.23□□□□□ -1.25
RNF144AP50876 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.23□□□□□ -1.25
RNF144AP50876 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC7.23□□□□□ -1.25
RNF144AP50876 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF144AP50876 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF144AP50876 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC7.23□□□□□ -1.25
RNF144AP50876 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF144AP50876 AC142086.3-201ENST00000563896 802 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7.23□□□□□ -1.25
RNF144AP50876 YTHDF2P1-201ENST00000604759 1271 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF144AP50876 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF144AP50876 AC103710.4-201ENST00000609301 899 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 AC090425.1-201ENST00000610007 140 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 MIR6751-201ENST00000610479 63 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 AL132822.1-201ENST00000617063 513 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 MED15P6-202ENST00000621415 787 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 RMST_7.1-201ENST00000621935 268 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 AC108724.2-201ENST00000634593 290 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF144AP50876 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 AC183089.2-201ENST00000637931 916 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
RNF144AP50876 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 SMG1P1-202ENST00000309865 4223 ntBASIC7.23□□□□□ -1.25
RNF144AP50876 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
RNF144AP50876 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF144AP50876 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF144AP50876 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF144AP50876 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RNF144AP50876 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF144AP50876 ZNF37BP-203ENST00000452306 1352 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 SALL1P1-201ENST00000438101 3837 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
RNF144AP50876 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.22□□□□□ -1.25
RNF144AP50876 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RNF144AP50876 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF144AP50876 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF144AP50876 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.22□□□□□ -1.25
RNF144AP50876 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
RNF144AP50876 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF144AP50876 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
RNF144AP50876 OR56A4-201ENST00000330728 1209 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RNF144AP50876 Y_RNA.145-201ENST00000363527 102 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 RNU6-1339P-201ENST00000363574 91 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 RN7SKP50-201ENST00000364694 315 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
RNF144AP50876 FANK1-201ENST00000368689 522 ntTSL 3 BASIC7.22□□□□□ -1.25
RNF144AP50876 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RNF144AP50876 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
RNF144AP50876 CBWD1-207ENST00000382447 1241 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RNF144AP50876 SNORA10-201ENST00000384084 133 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 Y_RNA.481-201ENST00000384373 102 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 MIR654-201ENST00000385199 81 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 MT-TR-201ENST00000387439 65 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 U8.14-201ENST00000390843 143 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 H2AFZP3-201ENST00000394213 387 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF144AP50876 AL354719.1-201ENST00000406535 843 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 RNU6-908P-201ENST00000410160 94 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 RN7SKP58-201ENST00000411010 305 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 AC211486.3-201ENST00000412694 621 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC7.22□□□□□ -1.25
RNF144AP50876 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC7.22□□□□□ -1.25
RNF144AP50876 RBMY2GP-201ENST00000418671 1034 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC7.22□□□□□ -1.25
RNF144AP50876 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC7.22□□□□□ -1.25
RNF144AP50876 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.22□□□□□ -1.25
RNF144AP50876 Z93242.1-201ENST00000427102 353 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC7.22□□□□□ -1.25
RNF144AP50876 RBMY2NP-201ENST00000434454 1028 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.22□□□□□ -1.25
RNF144AP50876 RPS10P3-201ENST00000439253 494 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 AC123904.1-201ENST00000441072 368 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 AL512605.1-202ENST00000441919 381 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC7.22□□□□□ -1.25
RNF144AP50876 MTND6P13-201ENST00000443510 523 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 AC104306.1-201ENST00000449702 371 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 AC006480.1-201ENST00000449887 378 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 OR52I1-201ENST00000450052 1050 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 AL590365.1-201ENST00000450788 243 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC7.22□□□□□ -1.25
RNF144AP50876 AC010878.1-201ENST00000456500 1047 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 AC008026.1-201ENST00000460492 447 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC7.22□□□□□ -1.25
RNF144AP50876 RN7SL89P-201ENST00000480252 283 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RNF144AP50876 RPS15AP36-201ENST00000492022 382 ntBASIC7.22□□□□□ -1.25
RNF144AP50876 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms