Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCN4AP35499 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCN4AP35499 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCN4AP35499 AC005224.3-201ENST00000584683 2140 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 AL353763.1-201ENST00000624467 1628 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
SCN4AP35499 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.48□□□□□ -1.37
SCN4AP35499 UG0898H09-202ENST00000623646 7040 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
SCN4AP35499 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN4AP35499 AL121768.1-201ENST00000613917 2544 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.48□□□□□ -1.37
SCN4AP35499 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCN4AP35499 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.48□□□□□ -1.37
SCN4AP35499 DNAJC19P7-201ENST00000428811 344 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 GSTM5P1-201ENST00000434751 660 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 AC234781.3-201ENST00000452540 973 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 NUTF2P7-201ENST00000453086 375 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SCN4AP35499 TOMM20P2-201ENST00000540082 421 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 AL121594.2-201ENST00000541658 472 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.48□□□□□ -1.37
SCN4AP35499 AC009597.2-201ENST00000604659 592 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 NANOGP3-201ENST00000605855 286 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 MIR6780A-201ENST00000615089 68 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN4AP35499 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.48□□□□□ -1.37
SCN4AP35499 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.48□□□□□ -1.37
SCN4AP35499 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCN4AP35499 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SCN4AP35499 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
SCN4AP35499 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SCN4AP35499 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SCN4AP35499 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCN4AP35499 MIPEPP2-201ENST00000422560 1819 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
SCN4AP35499 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SCN4AP35499 RNA5SP455-201ENST00000365190 119 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN4AP35499 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.48□□□□□ -1.37
SCN4AP35499 AL590399.4-201ENST00000436561 601 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.48□□□□□ -1.37
SCN4AP35499 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.48□□□□□ -1.37
SCN4AP35499 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 MTND6P2-201ENST00000512226 524 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 RN7SKP67-201ENST00000515905 235 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 RNA5SP373-201ENST00000517271 95 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.48□□□□□ -1.37
SCN4AP35499 AP005403.1-201ENST00000579720 229 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 MIR4737-201ENST00000583979 81 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN4AP35499 AC012414.7-202ENST00000622705 1090 ntBASIC6.48□□□□□ -1.37
SCN4AP35499 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SCN4AP35499 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN4AP35499 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCN4AP35499 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCN4AP35499 AP004607.3-201ENST00000530354 3915 ntBASIC6.47□□□□□ -1.37
SCN4AP35499 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SCN4AP35499 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 NXF4-202ENST00000416098 1465 ntBASIC6.47□□□□□ -1.37
SCN4AP35499 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
SCN4AP35499 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.47□□□□□ -1.37
SCN4AP35499 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
SCN4AP35499 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 AC007996.1-201ENST00000620414 2821 ntBASIC6.47□□□□□ -1.37
SCN4AP35499 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 TMA16P2-201ENST00000413187 601 ntBASIC6.47□□□□□ -1.37
SCN4AP35499 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SCN4AP35499 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.47□□□□□ -1.37
SCN4AP35499 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SCN4AP35499 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.47□□□□□ -1.37
SCN4AP35499 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
SCN4AP35499 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 UBE2FP2-201ENST00000566646 462 ntBASIC6.47□□□□□ -1.37
SCN4AP35499 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.47□□□□□ -1.37
SCN4AP35499 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.47□□□□□ -1.37
SCN4AP35499 AC011487.3-201ENST00000593607 453 ntBASIC6.47□□□□□ -1.37
SCN4AP35499 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.47□□□□□ -1.37
SCN4AP35499 AC015660.5-201ENST00000623238 564 ntBASIC6.47□□□□□ -1.37
SCN4AP35499 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SCN4AP35499 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
SCN4AP35499 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN4AP35499 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.46□□□□□ -1.37
SCN4AP35499 PRNCR1-201ENST00000635449 12727 ntBASIC6.46□□□□□ -1.37
SCN4AP35499 AC119751.6-201ENST00000416712 186 ntBASIC6.46□□□□□ -1.37
SCN4AP35499 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.46□□□□□ -1.37
SCN4AP35499 VN1R21P-201ENST00000426703 765 ntBASIC6.46□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms