Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.04□□□□□ -1.28
CNGA1P29973 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.04□□□□□ -1.28
CNGA1P29973 AL158211.1-201ENST00000566763 763 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 MIR4489-201ENST00000578869 62 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 AC091057.3-201ENST00000602684 733 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 AP005431.1-201ENST00000618479 319 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 MIR7159-201ENST00000620587 66 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 AC073342.3-201ENST00000624211 193 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.04□□□□□ -1.28
CNGA1P29973 AC009452.1-201ENST00000640823 606 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.04□□□□□ -1.28
CNGA1P29973 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 AF287957.1-201ENST00000607368 1595 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
CNGA1P29973 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CNGA1P29973 AC006213.6-201ENST00000623722 4179 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CNGA1P29973 RBPJP7-201ENST00000442803 1447 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 RBPJP5-201ENST00000449433 1447 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.03□□□□□ -1.28
CNGA1P29973 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CNGA1P29973 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.03□□□□□ -1.28
CNGA1P29973 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CNGA1P29973 DNM1P47-203ENST00000571780 12667 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CNGA1P29973 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.03□□□□□ -1.28
CNGA1P29973 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CNGA1P29973 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CNGA1P29973 FAM32BP-201ENST00000344033 333 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 RNA5SP333-201ENST00000363466 118 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 RNU1-49P-201ENST00000363468 159 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 RNA5SP334-201ENST00000364825 118 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 MIR1203-201ENST00000408812 85 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 AC245096.1-201ENST00000413104 546 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC7.03□□□□□ -1.28
CNGA1P29973 AL035660.1-201ENST00000422041 222 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 AL121776.1-201ENST00000429337 372 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 PCBP2P1-201ENST00000437262 977 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 AC006994.1-201ENST00000438212 839 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.03□□□□□ -1.28
CNGA1P29973 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 AC015983.1-201ENST00000441577 373 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.03□□□□□ -1.28
CNGA1P29973 MYO5BP2-201ENST00000449815 1277 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 AL445665.1-202ENST00000452436 324 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 RPS26P39-201ENST00000469206 341 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.03□□□□□ -1.28
CNGA1P29973 AC008638.1-201ENST00000506035 866 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.03□□□□□ -1.28
CNGA1P29973 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.03□□□□□ -1.28
CNGA1P29973 DUX4L52-201ENST00000549363 777 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 AL121594.4-201ENST00000556211 1196 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.03□□□□□ -1.28
CNGA1P29973 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.03□□□□□ -1.28
CNGA1P29973 AC090666.1-201ENST00000578241 445 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 AP005119.1-201ENST00000580956 292 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.03□□□□□ -1.28
CNGA1P29973 SNX6P1-201ENST00000601728 1224 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.03□□□□□ -1.28
CNGA1P29973 AC078880.5-201ENST00000617845 421 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
CNGA1P29973 AL158062.1-201ENST00000619632 745 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 AC021422.1-201ENST00000621212 473 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 AC012254.5-201ENST00000623573 478 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC7.03□□□□□ -1.28
CNGA1P29973 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC7.03□□□□□ -1.28
CNGA1P29973 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.03□□□□□ -1.28
CNGA1P29973 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.03□□□□□ -1.28
CNGA1P29973 RBMY1HP-201ENST00000382759 1389 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.03□□□□□ -1.28
CNGA1P29973 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CNGA1P29973 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.03□□□□□ -1.28
CNGA1P29973 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CNGA1P29973 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
CNGA1P29973 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CNGA1P29973 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
CNGA1P29973 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CNGA1P29973 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CNGA1P29973 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
CNGA1P29973 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.02□□□□□ -1.28
CNGA1P29973 AL731556.1-201ENST00000394628 3711 ntBASIC7.02□□□□□ -1.29
CNGA1P29973 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CNGA1P29973 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CNGA1P29973 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CNGA1P29973 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CNGA1P29973 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CNGA1P29973 HMGB1P10-201ENST00000395823 563 ntBASIC7.02□□□□□ -1.29
CNGA1P29973 OR2W4P-201ENST00000406496 926 ntBASIC7.02□□□□□ -1.29
CNGA1P29973 RNU2-17P-201ENST00000410290 190 ntBASIC7.02□□□□□ -1.29
CNGA1P29973 U3.43-201ENST00000410734 213 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms