Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.76□□□□□ -1.33
COL8A1P27658 IGKV1OR1-1-201ENST00000613775 347 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 AC008250.2-201ENST00000615261 205 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 AC091925.1-201ENST00000623204 462 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC6.76□□□□□ -1.33
COL8A1P27658 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL8A1P27658 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL8A1P27658 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
COL8A1P27658 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL8A1P27658 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL8A1P27658 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL8A1P27658 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC6.76□□□□□ -1.33
COL8A1P27658 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC6.76□□□□□ -1.33
COL8A1P27658 CDY7P-201ENST00000429883 1604 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL8A1P27658 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL8A1P27658 AC073324.1-201ENST00000425993 1435 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC6.75□□□□□ -1.33
COL8A1P27658 AC011447.6-201ENST00000623510 2598 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 AC138393.1-206ENST00000540997 1886 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 AC078795.1-201ENST00000602342 3143 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
COL8A1P27658 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 MIR369-201ENST00000362155 70 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.75□□□□□ -1.33
COL8A1P27658 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
COL8A1P27658 RNU6-43P-201ENST00000384302 107 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 Y_RNA.579-201ENST00000390939 94 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 FTH1P3-201ENST00000394290 584 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 OR9R1P-201ENST00000412200 877 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.75□□□□□ -1.33
COL8A1P27658 RPS27AP14-201ENST00000422868 454 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 NANOGP4-201ENST00000427230 913 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC6.75□□□□□ -1.33
COL8A1P27658 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.75□□□□□ -1.33
COL8A1P27658 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.75□□□□□ -1.33
COL8A1P27658 MTND6P18-201ENST00000439477 513 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC6.75□□□□□ -1.33
COL8A1P27658 EIF5AP4-201ENST00000441206 465 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC6.75□□□□□ -1.33
COL8A1P27658 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6.75□□□□□ -1.33
COL8A1P27658 ARL2BPP7-201ENST00000446421 490 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
COL8A1P27658 RN7SL418P-201ENST00000473031 287 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.75□□□□□ -1.33
COL8A1P27658 RN7SL655P-201ENST00000486087 298 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 ACTG1P13-201ENST00000486987 1043 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC6.75□□□□□ -1.33
COL8A1P27658 MTCO2P24-201ENST00000515611 426 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 RNU6-1271P-201ENST00000517049 105 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 AC091982.1-201ENST00000518134 520 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 AC100823.2-201ENST00000518337 699 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.75□□□□□ -1.33
COL8A1P27658 OR5M4P-201ENST00000529436 925 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 AP003122.4-201ENST00000530980 758 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.75□□□□□ -1.33
COL8A1P27658 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.75□□□□□ -1.33
COL8A1P27658 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.75□□□□□ -1.33
COL8A1P27658 AC107958.1-201ENST00000556576 290 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.75□□□□□ -1.33
COL8A1P27658 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.75□□□□□ -1.33
COL8A1P27658 RN7SL426P-201ENST00000579106 295 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 AP001004.1-201ENST00000582468 324 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 WDR45BP1-201ENST00000583470 1029 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.75□□□□□ -1.33
COL8A1P27658 OR5AH1P-201ENST00000595968 283 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC6.75□□□□□ -1.33
COL8A1P27658 AL390058.1-201ENST00000603834 629 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 AC091488.1-201ENST00000604239 660 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.75□□□□□ -1.33
COL8A1P27658 U1.22-201ENST00000605806 164 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 AC037198.3-201ENST00000616754 526 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 AC018692.2-201ENST00000624130 348 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 CRYM-AS1-204ENST00000637983 556 ntBASIC6.75□□□□□ -1.33
COL8A1P27658 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL8A1P27658 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms