Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 OR10V3P-201ENST00000525712 725 ntBASIC5.6□□□□□ -1.51
TNFSF4P23510 AC084824.2-201ENST00000548906 345 ntBASIC5.6□□□□□ -1.51
TNFSF4P23510 AC037479.1-201ENST00000558361 625 ntBASIC5.6□□□□□ -1.51
TNFSF4P23510 AL158211.1-201ENST00000566763 763 ntBASIC5.6□□□□□ -1.51
TNFSF4P23510 MIR212-201ENST00000586026 110 ntBASIC5.6□□□□□ -1.51
TNFSF4P23510 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.6□□□□□ -1.51
TNFSF4P23510 AL953862.2-201ENST00000603089 820 ntBASIC5.6□□□□□ -1.51
TNFSF4P23510 BUB1P1-201ENST00000603541 607 ntBASIC5.6□□□□□ -1.51
TNFSF4P23510 AL683813.2-201ENST00000605245 502 ntBASIC5.6□□□□□ -1.51
TNFSF4P23510 AC024060.1-201ENST00000607052 494 ntBASIC5.6□□□□□ -1.51
TNFSF4P23510 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.6□□□□□ -1.51
TNFSF4P23510 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TNFSF4P23510 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TNFSF4P23510 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.6□□□□□ -1.51
TNFSF4P23510 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.6□□□□□ -1.51
TNFSF4P23510 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.6□□□□□ -1.51
TNFSF4P23510 AL121594.5-201ENST00000631724 573 ntBASIC5.6□□□□□ -1.51
TNFSF4P23510 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.6□□□□□ -1.51
TNFSF4P23510 AC099654.15-201ENST00000639802 509 ntBASIC5.6□□□□□ -1.51
TNFSF4P23510 AL596275.2-207ENST00000641188 675 ntBASIC5.6□□□□□ -1.51
TNFSF4P23510 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.6□□□□□ -1.51
TNFSF4P23510 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TNFSF4P23510 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.6□□□□□ -1.51
TNFSF4P23510 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TNFSF4P23510 AC009313.2-201ENST00000417893 1941 ntBASIC5.6□□□□□ -1.51
TNFSF4P23510 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
TNFSF4P23510 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TNFSF4P23510 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.59□□□□□ -1.51
TNFSF4P23510 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TNFSF4P23510 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
TNFSF4P23510 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 ZNF29P-201ENST00000225587 168 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 FAM32BP-201ENST00000344033 333 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 RNA5SP188-201ENST00000362916 129 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.59□□□□□ -1.51
TNFSF4P23510 TAF13P2-201ENST00000416876 286 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 NANOGP5-201ENST00000424456 877 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.59□□□□□ -1.51
TNFSF4P23510 AC092634.2-201ENST00000428146 1010 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 AP001324.1-201ENST00000428553 399 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 MTCYBP15-201ENST00000433123 1127 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 GTF2IP3-201ENST00000433887 494 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 AC009237.1-201ENST00000442127 744 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 GAPDHP37-201ENST00000442317 968 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.59□□□□□ -1.51
TNFSF4P23510 AC243772.1-201ENST00000451620 410 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 RNU7-140P-201ENST00000459546 60 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.59□□□□□ -1.51
TNFSF4P23510 AC005912.1-201ENST00000495392 255 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 AC063943.2-201ENST00000495697 534 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 AC106822.1-201ENST00000502647 526 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 AC093870.1-201ENST00000506837 213 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.59□□□□□ -1.51
TNFSF4P23510 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.59□□□□□ -1.51
TNFSF4P23510 AC010285.3-201ENST00000511668 676 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.59□□□□□ -1.51
TNFSF4P23510 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC5.59□□□□□ -1.51
TNFSF4P23510 IGHV3-57-201ENST00000520143 280 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 AC010306.1-201ENST00000523223 1117 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.59□□□□□ -1.51
TNFSF4P23510 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.59□□□□□ -1.51
TNFSF4P23510 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.59□□□□□ -1.51
TNFSF4P23510 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.59□□□□□ -1.51
TNFSF4P23510 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 AC023968.1-201ENST00000560719 475 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TNFSF4P23510 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.59□□□□□ -1.51
TNFSF4P23510 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.59□□□□□ -1.51
TNFSF4P23510 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.59□□□□□ -1.51
TNFSF4P23510 AP001160.4-201ENST00000596971 382 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 BNIP3P38-201ENST00000601117 544 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.59□□□□□ -1.51
TNFSF4P23510 AL359704.2-201ENST00000604335 521 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 AC009948.4-201ENST00000604692 675 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 AL589743.6-201ENST00000611025 117 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.59□□□□□ -1.51
TNFSF4P23510 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF4P23510 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.59□□□□□ -1.51
TNFSF4P23510 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.59□□□□□ -1.51
TNFSF4P23510 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.59□□□□□ -1.51
TNFSF4P23510 AC012653.2-201ENST00000621880 420 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 AP000770.2-201ENST00000623694 100 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 AC114546.4-201ENST00000624413 369 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 BX649567.1-201ENST00000642071 1134 ntBASIC5.59□□□□□ -1.51
TNFSF4P23510 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
TNFSF4P23510 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.59□□□□□ -1.51
TNFSF4P23510 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.59□□□□□ -1.51
TNFSF4P23510 BX005019.1-201ENST00000561881 1810 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms