Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC091042.1-201ENST00000579213 173 ntBASIC8.93□□□□□ -0.98
TOPBP1Q92547 TEX41-238ENST00000604253 709 ntTSL 5 BASIC8.93□□□□□ -0.98
TOPBP1Q92547 AL391358.1-201ENST00000605342 190 ntBASIC8.93□□□□□ -0.98
TOPBP1Q92547 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC8.93□□□□□ -0.98
TOPBP1Q92547 AP001885.1-201ENST00000621658 558 ntBASIC8.93□□□□□ -0.98
TOPBP1Q92547 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TOPBP1Q92547 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TOPBP1Q92547 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TOPBP1Q92547 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
TOPBP1Q92547 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TOPBP1Q92547 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TOPBP1Q92547 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
TOPBP1Q92547 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC8.93□□□□□ -0.98
TOPBP1Q92547 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
TOPBP1Q92547 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TOPBP1Q92547 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
TOPBP1Q92547 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
TOPBP1Q92547 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
TOPBP1Q92547 RNA5SP113-201ENST00000410486 84 ntBASIC8.92□□□□□ -0.98
TOPBP1Q92547 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC8.92□□□□□ -0.98
TOPBP1Q92547 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC8.92□□□□□ -0.98
TOPBP1Q92547 AP005131.7-201ENST00000610087 611 ntBASIC8.92□□□□□ -0.98
TOPBP1Q92547 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC8.92□□□□□ -0.98
TOPBP1Q92547 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
TOPBP1Q92547 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC8.92□□□□□ -0.98
TOPBP1Q92547 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TOPBP1Q92547 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.92□□□□□ -0.98
TOPBP1Q92547 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TOPBP1Q92547 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TOPBP1Q92547 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
TOPBP1Q92547 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
TOPBP1Q92547 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC8.91□□□□□ -0.98
TOPBP1Q92547 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.91□□□□□ -0.98
TOPBP1Q92547 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
TOPBP1Q92547 SNORD1C-201ENST00000363315 78 ntBASIC8.91□□□□□ -0.98
TOPBP1Q92547 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC8.91□□□□□ -0.98
TOPBP1Q92547 AP002530.1-201ENST00000405705 684 ntBASIC8.91□□□□□ -0.98
TOPBP1Q92547 RNU2-50P-201ENST00000410494 143 ntBASIC8.91□□□□□ -0.98
TOPBP1Q92547 RPS17P17-201ENST00000419392 409 ntBASIC8.91□□□□□ -0.98
TOPBP1Q92547 AC069213.2-201ENST00000420238 366 ntBASIC8.91□□□□□ -0.98
TOPBP1Q92547 AC007064.3-201ENST00000422608 359 ntBASIC8.91□□□□□ -0.98
TOPBP1Q92547 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC8.91□□□□□ -0.98
TOPBP1Q92547 HMGN2P25-201ENST00000486956 268 ntBASIC8.91□□□□□ -0.98
TOPBP1Q92547 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC8.91□□□□□ -0.98
TOPBP1Q92547 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC8.91□□□□□ -0.98
TOPBP1Q92547 RN7SL690P-201ENST00000582087 240 ntBASIC8.91□□□□□ -0.98
TOPBP1Q92547 AC009237.13-201ENST00000603193 276 ntBASIC8.91□□□□□ -0.98
TOPBP1Q92547 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC8.91□□□□□ -0.98
TOPBP1Q92547 AL133481.2-203ENST00000607558 139 ntBASIC8.91□□□□□ -0.98
TOPBP1Q92547 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC8.91□□□□□ -0.98
TOPBP1Q92547 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
TOPBP1Q92547 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.91□□□□□ -0.98
TOPBP1Q92547 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
TOPBP1Q92547 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
TOPBP1Q92547 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TOPBP1Q92547 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
TOPBP1Q92547 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
TOPBP1Q92547 AC123769.2-201ENST00000624332 5984 ntBASIC8.91□□□□□ -0.98
TOPBP1Q92547 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
TOPBP1Q92547 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
TOPBP1Q92547 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
TOPBP1Q92547 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
TOPBP1Q92547 Y_RNA.126-201ENST00000363382 111 ntBASIC8.9□□□□□ -0.98
TOPBP1Q92547 RIMKLBP2-201ENST00000424737 654 ntBASIC8.9□□□□□ -0.98
TOPBP1Q92547 USP24P1-201ENST00000433802 779 ntBASIC8.9□□□□□ -0.98
TOPBP1Q92547 RBMY2TP-201ENST00000451162 947 ntBASIC8.9□□□□□ -0.98
TOPBP1Q92547 NUTF2P7-201ENST00000453086 375 ntBASIC8.9□□□□□ -0.98
TOPBP1Q92547 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC8.9□□□□□ -0.98
TOPBP1Q92547 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC8.9□□□□□ -0.98
TOPBP1Q92547 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC8.9□□□□□ -0.98
TOPBP1Q92547 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC8.9□□□□□ -0.98
TOPBP1Q92547 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC8.9□□□□□ -0.98
TOPBP1Q92547 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
TOPBP1Q92547 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
TOPBP1Q92547 USP8-204ENST00000425032 3559 ntTSL 2 BASIC8.9□□□□□ -0.98
TOPBP1Q92547 AL132640.2-201ENST00000559968 1698 ntBASIC8.9□□□□□ -0.98
TOPBP1Q92547 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.9□□□□□ -0.98
TOPBP1Q92547 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
TOPBP1Q92547 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
TOPBP1Q92547 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
TOPBP1Q92547 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
TOPBP1Q92547 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC8.9□□□□□ -0.98
TOPBP1Q92547 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
TOPBP1Q92547 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
TOPBP1Q92547 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC8.9□□□□□ -0.98
TOPBP1Q92547 EEF1A1P33-201ENST00000554413 1362 ntBASIC8.9□□□□□ -0.98
TOPBP1Q92547 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
TOPBP1Q92547 WBP11P1-201ENST00000562560 1931 ntBASIC8.9□□□□□ -0.98
TOPBP1Q92547 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
TOPBP1Q92547 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
TOPBP1Q92547 IARS-213ENST00000627121 4587 ntTSL 5 BASIC8.9□□□□□ -0.99
TOPBP1Q92547 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
TOPBP1Q92547 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC8.9□□□□□ -0.99
TOPBP1Q92547 AC004690.1-201ENST00000418216 328 ntBASIC8.9□□□□□ -0.99
TOPBP1Q92547 CNOT7P1-201ENST00000429006 852 ntBASIC8.9□□□□□ -0.99
TOPBP1Q92547 AL359265.2-201ENST00000434367 631 ntBASIC8.9□□□□□ -0.99
TOPBP1Q92547 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC8.9□□□□□ -0.99
TOPBP1Q92547 COX6B1P5-201ENST00000509843 249 ntBASIC8.9□□□□□ -0.99
TOPBP1Q92547 RNA5SP43-201ENST00000516559 110 ntBASIC8.9□□□□□ -0.99
TOPBP1Q92547 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms