Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 AC111000.3-201ENST00000508057 576 ntBASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 TOMM20P2-201ENST00000540082 421 ntBASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 PCNPP1-201ENST00000552501 511 ntBASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 AC006600.2-201ENST00000624834 2506 ntBASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ALMS1Q8TCU4 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 ALB-219ENST00000621085 1418 ntTSL 5 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 AL121594.2-201ENST00000541658 472 ntBASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 TMA16P2-201ENST00000413187 601 ntBASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 AC004975.1-201ENST00000428733 208 ntBASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 AL136455.1-201ENST00000441083 1240 ntBASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 MRPS33P2-201ENST00000507850 322 ntBASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 CYP4F27P-201ENST00000514557 494 ntBASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 AC005341.1-201ENST00000571086 708 ntBASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 AP003789.1-201ENST00000617737 605 ntBASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 AL353796.1-201ENST00000561542 3241 ntBASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ALMS1Q8TCU4 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 RPS26P38-201ENST00000414476 348 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 RPS3AP38-201ENST00000435889 763 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AL353763.1-201ENST00000624467 1628 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 NXF4-202ENST00000416098 1465 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 RN7SKP227-201ENST00000364445 330 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AC007559.1-201ENST00000428736 355 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 RPL34P27-201ENST00000428810 349 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 BZW1P1-201ENST00000454901 1240 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AC026402.1-201ENST00000513642 170 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AC100784.1-201ENST00000522790 310 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 AC027667.1-201ENST00000545814 304 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.64□□□□□ -1.83
ALMS1Q8TCU4 MIR4420-201ENST00000583944 77 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms