Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 MARK2P4-201ENST00000503381 2380 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 RNA5SP433-201ENST00000364491 114 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 RPL23AP59-201ENST00000399415 461 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 EIF4A1P1-201ENST00000420241 934 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 MTCO1P45-201ENST00000431457 267 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 DNAJC19P4-201ENST00000440115 345 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AL137845.2-201ENST00000444292 988 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 MTCYBP42-201ENST00000444653 1130 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 PFN1P11-201ENST00000445829 389 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 SEPT14P24-201ENST00000447236 180 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 Z83838.1-202ENST00000456225 839 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 CCDC75P1-201ENST00000469247 791 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 HPRT1P2-201ENST00000505250 544 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AC091849.1-201ENST00000509920 121 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AL390198.2-201ENST00000510553 222 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 RNU6-314P-201ENST00000516574 104 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 RNU6-678P-201ENST00000516832 109 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AL078601.3-201ENST00000573303 535 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AC245052.7-201ENST00000601161 359 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 SMIM12P1-201ENST00000603004 274 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 LLPHP1-201ENST00000603571 367 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AC104458.1-201ENST00000608243 463 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 TTC3P1-201ENST00000399586 6081 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AP003972.1-201ENST00000625192 5446 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AC025040.2-201ENST00000558657 1852 ntBASIC8.68□□□□□ -1.02
RC3H1Q5TC82 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.68□□□□□ -1.02
RC3H1Q5TC82 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 OR56B2P-201ENST00000317102 954 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 RNU6-252P-201ENST00000363232 107 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.67□□□□□ -1.02
RC3H1Q5TC82 Z99497.1-201ENST00000421282 135 ntBASIC8.67□□□□□ -1.02
RC3H1Q5TC82 AC004448.2-201ENST00000422360 586 ntBASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms