Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 AC011477.1-204ENST00000623416 1325 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
GFRA1P56159 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
GFRA1P56159 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
GFRA1P56159 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
GFRA1P56159 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
GFRA1P56159 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.21□□□□□ -1.41
GFRA1P56159 AL354854.1-201ENST00000455940 1363 ntBASIC6.21□□□□□ -1.41
GFRA1P56159 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.21□□□□□ -1.41
GFRA1P56159 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.21□□□□□ -1.41
GFRA1P56159 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
GFRA1P56159 CCDC150P1-201ENST00000537123 2215 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 RN7SKP191-201ENST00000364713 306 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 RN7SKP130-201ENST00000364924 301 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 MIR320B1-201ENST00000390209 79 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
GFRA1P56159 SNORD65.1-201ENST00000390889 71 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.21□□□□□ -1.42
GFRA1P56159 TPT1P2-201ENST00000413105 503 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.21□□□□□ -1.42
GFRA1P56159 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.21□□□□□ -1.42
GFRA1P56159 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.21□□□□□ -1.42
GFRA1P56159 GAPDHP49-201ENST00000421421 961 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.21□□□□□ -1.42
GFRA1P56159 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC6.21□□□□□ -1.42
GFRA1P56159 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.21□□□□□ -1.42
GFRA1P56159 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
GFRA1P56159 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.21□□□□□ -1.42
GFRA1P56159 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.21□□□□□ -1.42
GFRA1P56159 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.21□□□□□ -1.42
GFRA1P56159 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC6.21□□□□□ -1.42
GFRA1P56159 RFC5P1-201ENST00000454419 874 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 PNPLA4P1-201ENST00000458328 305 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.21□□□□□ -1.42
GFRA1P56159 MTND1P16-201ENST00000465177 898 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 AC083806.1-201ENST00000468934 316 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.21□□□□□ -1.42
GFRA1P56159 NCOR1P1-202ENST00000486162 291 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 DYNLL1P6-201ENST00000503440 264 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 AC147055.4-201ENST00000504399 745 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 AC112198.1-201ENST00000505369 1220 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 PABPC1P1-201ENST00000506347 591 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 AC091965.2-201ENST00000512324 613 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.21□□□□□ -1.42
GFRA1P56159 CYP4F27P-201ENST00000514557 494 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 AC087808.1-201ENST00000520501 361 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.21□□□□□ -1.42
GFRA1P56159 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.21□□□□□ -1.42
GFRA1P56159 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.21□□□□□ -1.42
GFRA1P56159 OR4C2P-201ENST00000530855 1064 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.21□□□□□ -1.42
GFRA1P56159 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.21□□□□□ -1.42
GFRA1P56159 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.21□□□□□ -1.42
GFRA1P56159 MIR3611-201ENST00000584484 83 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.21□□□□□ -1.42
GFRA1P56159 AC020914.7-201ENST00000594477 545 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.21□□□□□ -1.42
GFRA1P56159 WISP1-OT1-201ENST00000602893 642 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 AC004948.1-201ENST00000609858 672 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.21□□□□□ -1.42
GFRA1P56159 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 AC009878.1-201ENST00000621819 340 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.21□□□□□ -1.42
GFRA1P56159 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
GFRA1P56159 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
GFRA1P56159 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
GFRA1P56159 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.21□□□□□ -1.42
GFRA1P56159 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.21□□□□□ -1.42
GFRA1P56159 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
GFRA1P56159 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.21□□□□□ -1.42
GFRA1P56159 SLC10A5P1-201ENST00000379063 1306 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 Z99496.1-201ENST00000469424 1477 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
GFRA1P56159 AC007996.1-201ENST00000620414 2821 ntBASIC6.21□□□□□ -1.42
GFRA1P56159 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
GFRA1P56159 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
GFRA1P56159 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
GFRA1P56159 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
GFRA1P56159 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms