Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.41□□□□□ -1.54
PKNOX1P55347 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.41□□□□□ -1.54
PKNOX1P55347 AC091912.1-201ENST00000511351 248 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 RN7SKP183-201ENST00000517169 324 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.41□□□□□ -1.54
PKNOX1P55347 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.41□□□□□ -1.54
PKNOX1P55347 AC138832.1-201ENST00000522871 556 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 AC027369.2-201ENST00000528030 440 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PKNOX1P55347 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.41□□□□□ -1.54
PKNOX1P55347 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.41□□□□□ -1.54
PKNOX1P55347 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PKNOX1P55347 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
PKNOX1P55347 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.41□□□□□ -1.54
PKNOX1P55347 AL356608.1-201ENST00000610034 820 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.41□□□□□ -1.54
PKNOX1P55347 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.41□□□□□ -1.54
PKNOX1P55347 OR8G3P-202ENST00000641572 1255 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PKNOX1P55347 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.41□□□□□ -1.54
PKNOX1P55347 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.41□□□□□ -1.54
PKNOX1P55347 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.41□□□□□ -1.54
PKNOX1P55347 AC092376.2-201ENST00000622621 4116 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PKNOX1P55347 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PKNOX1P55347 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.41□□□□□ -1.54
PKNOX1P55347 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.41□□□□□ -1.54
PKNOX1P55347 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.41□□□□□ -1.54
PKNOX1P55347 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PKNOX1P55347 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PKNOX1P55347 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PKNOX1P55347 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PKNOX1P55347 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.4□□□□□ -1.54
PKNOX1P55347 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PKNOX1P55347 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.4□□□□□ -1.54
PKNOX1P55347 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PKNOX1P55347 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
PKNOX1P55347 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PKNOX1P55347 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PKNOX1P55347 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PKNOX1P55347 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PKNOX1P55347 RNU1-65P-201ENST00000363919 148 ntBASIC5.4□□□□□ -1.54
PKNOX1P55347 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PKNOX1P55347 AC007161.1-204ENST00000423039 460 ntBASIC5.4□□□□□ -1.54
PKNOX1P55347 BX323845.3-201ENST00000428215 527 ntBASIC5.4□□□□□ -1.54
PKNOX1P55347 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.4□□□□□ -1.54
PKNOX1P55347 AC069154.1-201ENST00000432914 542 ntBASIC5.4□□□□□ -1.54
PKNOX1P55347 CLNS1AP1-201ENST00000435954 682 ntBASIC5.4□□□□□ -1.54
PKNOX1P55347 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.4□□□□□ -1.54
PKNOX1P55347 AC087672.1-201ENST00000479876 766 ntBASIC5.4□□□□□ -1.54
PKNOX1P55347 AL117692.1-201ENST00000494283 713 ntBASIC5.4□□□□□ -1.54
PKNOX1P55347 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.4□□□□□ -1.54
PKNOX1P55347 AC092349.1-201ENST00000504903 310 ntBASIC5.4□□□□□ -1.54
PKNOX1P55347 AC021193.1-201ENST00000511607 420 ntBASIC5.4□□□□□ -1.54
PKNOX1P55347 TRIM51DP-201ENST00000529746 596 ntBASIC5.4□□□□□ -1.54
PKNOX1P55347 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.4□□□□□ -1.54
PKNOX1P55347 MIR744-201ENST00000578242 98 ntBASIC5.4□□□□□ -1.54
PKNOX1P55347 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.4□□□□□ -1.54
PKNOX1P55347 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.4□□□□□ -1.54
PKNOX1P55347 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.4□□□□□ -1.54
PKNOX1P55347 RN7SL544P-201ENST00000617232 284 ntBASIC5.4□□□□□ -1.54
PKNOX1P55347 RN7SL763P-201ENST00000620922 284 ntBASIC5.4□□□□□ -1.54
PKNOX1P55347 AL512356.3-201ENST00000623005 461 ntBASIC5.4□□□□□ -1.54
PKNOX1P55347 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.4□□□□□ -1.55
PKNOX1P55347 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
PKNOX1P55347 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PKNOX1P55347 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
PKNOX1P55347 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
PKNOX1P55347 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
PKNOX1P55347 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
PKNOX1P55347 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
PKNOX1P55347 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PKNOX1P55347 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
PKNOX1P55347 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PKNOX1P55347 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.39□□□□□ -1.55
PKNOX1P55347 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PKNOX1P55347 AC073136.1-201ENST00000449426 2884 ntBASIC5.39□□□□□ -1.55
PKNOX1P55347 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PKNOX1P55347 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PKNOX1P55347 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.39□□□□□ -1.55
PKNOX1P55347 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.39□□□□□ -1.55
PKNOX1P55347 AC112198.2-201ENST00000426589 6996 ntBASIC5.39□□□□□ -1.55
PKNOX1P55347 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.39□□□□□ -1.55
PKNOX1P55347 SNORD56.6-201ENST00000384569 71 ntBASIC5.39□□□□□ -1.55
PKNOX1P55347 AC004386.1-201ENST00000393214 761 ntBASIC5.39□□□□□ -1.55
PKNOX1P55347 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.39□□□□□ -1.55
PKNOX1P55347 HMGB3P24-201ENST00000433260 622 ntBASIC5.39□□□□□ -1.55
PKNOX1P55347 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.39□□□□□ -1.55
PKNOX1P55347 AC006335.2-201ENST00000437993 330 ntBASIC5.39□□□□□ -1.55
PKNOX1P55347 AL512637.1-201ENST00000439523 1231 ntBASIC5.39□□□□□ -1.55
PKNOX1P55347 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.39□□□□□ -1.55
PKNOX1P55347 AL359839.1-201ENST00000451975 1160 ntBASIC5.39□□□□□ -1.55
PKNOX1P55347 ACA64.1-201ENST00000459171 127 ntBASIC5.39□□□□□ -1.55
PKNOX1P55347 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PKNOX1P55347 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.39□□□□□ -1.55
PKNOX1P55347 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.39□□□□□ -1.55
PKNOX1P55347 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.39□□□□□ -1.55
PKNOX1P55347 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.39□□□□□ -1.55
PKNOX1P55347 HMGB1P42-201ENST00000532126 553 ntBASIC5.39□□□□□ -1.55
PKNOX1P55347 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms