Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.34□□□□□ -1.39
HMGCS2P54868 AC137627.1-201ENST00000545761 289 ntBASIC6.34□□□□□ -1.39
HMGCS2P54868 NMNAT1P5-201ENST00000559657 841 ntBASIC6.34□□□□□ -1.39
HMGCS2P54868 H3F3BP2-201ENST00000583907 357 ntBASIC6.34□□□□□ -1.39
HMGCS2P54868 AC100827.5-201ENST00000615883 426 ntBASIC6.34□□□□□ -1.39
HMGCS2P54868 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.34□□□□□ -1.39
HMGCS2P54868 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGCS2P54868 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGCS2P54868 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
HMGCS2P54868 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.34□□□□□ -1.39
HMGCS2P54868 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGCS2P54868 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.34□□□□□ -1.39
HMGCS2P54868 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGCS2P54868 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.34□□□□□ -1.39
HMGCS2P54868 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HMGCS2P54868 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
HMGCS2P54868 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGCS2P54868 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.34□□□□□ -1.4
HMGCS2P54868 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
HMGCS2P54868 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HMGCS2P54868 AC112255.1-201ENST00000624070 2493 ntBASIC6.34□□□□□ -1.4
HMGCS2P54868 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HMGCS2P54868 AC114947.2-201ENST00000565748 2125 ntBASIC6.34□□□□□ -1.4
HMGCS2P54868 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HMGCS2P54868 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGCS2P54868 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGCS2P54868 AL353796.1-201ENST00000561542 3241 ntBASIC6.33□□□□□ -1.4
HMGCS2P54868 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HMGCS2P54868 HSPD1P8-201ENST00000400121 1658 ntBASIC6.33□□□□□ -1.4
HMGCS2P54868 ZNF812P-201ENST00000457674 1694 ntBASIC6.33□□□□□ -1.4
HMGCS2P54868 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HMGCS2P54868 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.33□□□□□ -1.4
HMGCS2P54868 AL139128.1-201ENST00000413921 941 ntBASIC6.33□□□□□ -1.4
HMGCS2P54868 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.33□□□□□ -1.4
HMGCS2P54868 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGCS2P54868 AC073410.1-201ENST00000435125 589 ntBASIC6.33□□□□□ -1.4
HMGCS2P54868 AL672138.1-201ENST00000450604 1015 ntBASIC6.33□□□□□ -1.4
HMGCS2P54868 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.33□□□□□ -1.4
HMGCS2P54868 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.33□□□□□ -1.4
HMGCS2P54868 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.33□□□□□ -1.4
HMGCS2P54868 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.33□□□□□ -1.4
HMGCS2P54868 AC090527.3-201ENST00000619041 548 ntBASIC6.33□□□□□ -1.4
HMGCS2P54868 AC073342.3-201ENST00000624211 193 ntBASIC6.33□□□□□ -1.4
HMGCS2P54868 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
HMGCS2P54868 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.33□□□□□ -1.4
HMGCS2P54868 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HMGCS2P54868 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.33□□□□□ -1.4
HMGCS2P54868 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.33□□□□□ -1.4
HMGCS2P54868 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGCS2P54868 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.33□□□□□ -1.4
HMGCS2P54868 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGCS2P54868 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGCS2P54868 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGCS2P54868 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGCS2P54868 AC107980.1-201ENST00000558671 3355 ntBASIC6.32□□□□□ -1.4
HMGCS2P54868 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMGCS2P54868 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMGCS2P54868 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGCS2P54868 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.32□□□□□ -1.4
HMGCS2P54868 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.32□□□□□ -1.4
HMGCS2P54868 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGCS2P54868 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.32□□□□□ -1.4
HMGCS2P54868 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMGCS2P54868 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMGCS2P54868 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
HMGCS2P54868 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGCS2P54868 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMGCS2P54868 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGCS2P54868 RN7SKP103-201ENST00000363848 320 ntBASIC6.32□□□□□ -1.4
HMGCS2P54868 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.32□□□□□ -1.4
HMGCS2P54868 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.32□□□□□ -1.4
HMGCS2P54868 RNF10P1-201ENST00000418589 369 ntBASIC6.32□□□□□ -1.4
HMGCS2P54868 RNGTTP1-201ENST00000420965 728 ntBASIC6.32□□□□□ -1.4
HMGCS2P54868 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.32□□□□□ -1.4
HMGCS2P54868 AC090114.3-201ENST00000479267 829 ntBASIC6.32□□□□□ -1.4
HMGCS2P54868 AP004607.2-201ENST00000533949 322 ntBASIC6.32□□□□□ -1.4
HMGCS2P54868 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.32□□□□□ -1.4
HMGCS2P54868 AL445528.2-201ENST00000620582 470 ntBASIC6.32□□□□□ -1.4
HMGCS2P54868 AL450226.2-201ENST00000622913 439 ntBASIC6.32□□□□□ -1.4
HMGCS2P54868 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMGCS2P54868 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGCS2P54868 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
HMGCS2P54868 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGCS2P54868 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HMGCS2P54868 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
HMGCS2P54868 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGCS2P54868 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMGCS2P54868 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGCS2P54868 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HMGCS2P54868 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMGCS2P54868 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMGCS2P54868 AL022323.4-201ENST00000623980 13120 ntBASIC6.31□□□□□ -1.4
HMGCS2P54868 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMGCS2P54868 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMGCS2P54868 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGCS2P54868 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.31□□□□□ -1.4
HMGCS2P54868 AL121886.1-201ENST00000358609 435 ntBASIC6.31□□□□□ -1.4
HMGCS2P54868 RNU4-4P-201ENST00000364588 130 ntBASIC6.31□□□□□ -1.4
HMGCS2P54868 RNA5SP487-201ENST00000410186 122 ntBASIC6.31□□□□□ -1.4
HMGCS2P54868 RN7SKP279-201ENST00000411383 298 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms