Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEK3P51956 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 FBXL21-201ENST00000297158 1305 ntBASIC6.31□□□□□ -1.4
NEK3P51956 AC008432.1-201ENST00000615912 1320 ntBASIC6.31□□□□□ -1.4
NEK3P51956 WDR95P-201ENST00000425638 1542 ntBASIC6.31□□□□□ -1.4
NEK3P51956 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.31□□□□□ -1.4
NEK3P51956 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 NXF4-202ENST00000416098 1465 ntBASIC6.31□□□□□ -1.4
NEK3P51956 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 RN7SKP240-201ENST00000410583 375 ntBASIC6.31□□□□□ -1.4
NEK3P51956 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.31□□□□□ -1.4
NEK3P51956 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.31□□□□□ -1.4
NEK3P51956 RPS7P14-201ENST00000426405 583 ntBASIC6.31□□□□□ -1.4
NEK3P51956 AC016027.5-201ENST00000427227 210 ntBASIC6.31□□□□□ -1.4
NEK3P51956 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.31□□□□□ -1.4
NEK3P51956 CYCSP11-201ENST00000436426 315 ntBASIC6.31□□□□□ -1.4
NEK3P51956 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.31□□□□□ -1.4
NEK3P51956 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.31□□□□□ -1.4
NEK3P51956 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.31□□□□□ -1.4
NEK3P51956 HIGD1AP16-201ENST00000450986 258 ntBASIC6.31□□□□□ -1.4
NEK3P51956 SEPT7P3-201ENST00000455017 621 ntBASIC6.31□□□□□ -1.4
NEK3P51956 RPL7L1P3-201ENST00000455249 689 ntBASIC6.31□□□□□ -1.4
NEK3P51956 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.31□□□□□ -1.4
NEK3P51956 RPL32P14-201ENST00000463196 378 ntBASIC6.31□□□□□ -1.4
NEK3P51956 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.31□□□□□ -1.4
NEK3P51956 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.31□□□□□ -1.4
NEK3P51956 MTND5P21-201ENST00000531961 522 ntBASIC6.31□□□□□ -1.4
NEK3P51956 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.31□□□□□ -1.4
NEK3P51956 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 AC104229.1-201ENST00000561364 255 ntBASIC6.31□□□□□ -1.4
NEK3P51956 AC104072.1-201ENST00000568817 668 ntBASIC6.31□□□□□ -1.4
NEK3P51956 MIR4675-201ENST00000577898 77 ntBASIC6.31□□□□□ -1.4
NEK3P51956 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.31□□□□□ -1.4
NEK3P51956 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.31□□□□□ -1.4
NEK3P51956 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.31□□□□□ -1.4
NEK3P51956 AP001823.1-201ENST00000604056 1003 ntBASIC6.31□□□□□ -1.4
NEK3P51956 AC079610.2-201ENST00000604818 690 ntBASIC6.31□□□□□ -1.4
NEK3P51956 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.31□□□□□ -1.4
NEK3P51956 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.31□□□□□ -1.4
NEK3P51956 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 AC093875.1-201ENST00000623688 504 ntBASIC6.31□□□□□ -1.4
NEK3P51956 AC116667.2-201ENST00000641075 823 ntBASIC6.31□□□□□ -1.4
NEK3P51956 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NEK3P51956 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.31□□□□□ -1.4
NEK3P51956 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
NEK3P51956 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.31□□□□□ -1.4
NEK3P51956 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
NEK3P51956 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NEK3P51956 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NEK3P51956 HDAC1P2-201ENST00000453661 1398 ntBASIC6.31□□□□□ -1.4
NEK3P51956 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.31□□□□□ -1.4
NEK3P51956 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NEK3P51956 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.3□□□□□ -1.4
NEK3P51956 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
NEK3P51956 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NEK3P51956 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.3□□□□□ -1.4
NEK3P51956 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NEK3P51956 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NEK3P51956 HSPD1P9-201ENST00000420325 1636 ntBASIC6.3□□□□□ -1.4
NEK3P51956 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.3□□□□□ -1.4
NEK3P51956 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
NEK3P51956 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.3□□□□□ -1.4
NEK3P51956 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NEK3P51956 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NEK3P51956 RNU6-532P-201ENST00000384318 107 ntBASIC6.3□□□□□ -1.4
NEK3P51956 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.3□□□□□ -1.4
NEK3P51956 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
NEK3P51956 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.3□□□□□ -1.4
NEK3P51956 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.3□□□□□ -1.4
NEK3P51956 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.3□□□□□ -1.4
NEK3P51956 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.3□□□□□ -1.4
NEK3P51956 AL035458.1-201ENST00000433096 585 ntBASIC6.3□□□□□ -1.4
NEK3P51956 AL390879.1-201ENST00000439143 386 ntBASIC6.3□□□□□ -1.4
NEK3P51956 AMYP1-201ENST00000440059 1023 ntBASIC6.3□□□□□ -1.4
NEK3P51956 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.3□□□□□ -1.4
NEK3P51956 MORF4-201ENST00000447135 971 ntBASIC6.3□□□□□ -1.4
NEK3P51956 AC097463.1-201ENST00000447288 481 ntBASIC6.3□□□□□ -1.4
NEK3P51956 VPS25P1-201ENST00000455691 508 ntBASIC6.3□□□□□ -1.4
NEK3P51956 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.3□□□□□ -1.4
NEK3P51956 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.3□□□□□ -1.4
NEK3P51956 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.3□□□□□ -1.4
NEK3P51956 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.3□□□□□ -1.4
NEK3P51956 BUD31P1-201ENST00000521828 359 ntBASIC6.3□□□□□ -1.4
NEK3P51956 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.3□□□□□ -1.4
NEK3P51956 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.3□□□□□ -1.4
NEK3P51956 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms