Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 KARSP1-201ENST00000451871 1752 ntBASIC6□□□□□ -1.45
CASP4P49662 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6□□□□□ -1.45
CASP4P49662 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6□□□□□ -1.45
CASP4P49662 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CASP4P49662 AC003973.3-201ENST00000624863 2822 ntBASIC5.99□□□□□ -1.45
CASP4P49662 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CASP4P49662 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.99□□□□□ -1.45
CASP4P49662 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CASP4P49662 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.99□□□□□ -1.45
CASP4P49662 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.99□□□□□ -1.45
CASP4P49662 RN7SKP6-201ENST00000364795 319 ntBASIC5.99□□□□□ -1.45
CASP4P49662 SNORA70.6-201ENST00000383934 134 ntBASIC5.99□□□□□ -1.45
CASP4P49662 MIR551A-201ENST00000385042 96 ntBASIC5.99□□□□□ -1.45
CASP4P49662 SNORA17A-201ENST00000391185 133 ntBASIC5.99□□□□□ -1.45
CASP4P49662 PPIAP9-201ENST00000403866 498 ntBASIC5.99□□□□□ -1.45
CASP4P49662 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.99□□□□□ -1.45
CASP4P49662 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.99□□□□□ -1.45
CASP4P49662 RPL12P11-201ENST00000439970 501 ntBASIC5.99□□□□□ -1.45
CASP4P49662 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.99□□□□□ -1.45
CASP4P49662 RANP1-206ENST00000455094 651 ntBASIC5.99□□□□□ -1.45
CASP4P49662 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.99□□□□□ -1.45
CASP4P49662 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CASP4P49662 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.99□□□□□ -1.45
CASP4P49662 OR8G3P-201ENST00000533406 921 ntBASIC5.99□□□□□ -1.45
CASP4P49662 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.99□□□□□ -1.45
CASP4P49662 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.99□□□□□ -1.45
CASP4P49662 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.99□□□□□ -1.45
CASP4P49662 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CASP4P49662 MIR4433B-201ENST00000581329 102 ntBASIC5.99□□□□□ -1.45
CASP4P49662 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.99□□□□□ -1.45
CASP4P49662 AC104695.2-201ENST00000605056 775 ntBASIC5.99□□□□□ -1.45
CASP4P49662 AC007786.3-201ENST00000615154 596 ntBASIC5.99□□□□□ -1.45
CASP4P49662 AC021766.1-201ENST00000624404 741 ntBASIC5.99□□□□□ -1.45
CASP4P49662 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.99□□□□□ -1.45
CASP4P49662 SNORA17.5-201ENST00000630429 132 ntBASIC5.99□□□□□ -1.45
CASP4P49662 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.99□□□□□ -1.45
CASP4P49662 AC073869.8-201ENST00000641806 335 ntBASIC5.99□□□□□ -1.45
CASP4P49662 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CASP4P49662 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CASP4P49662 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.99□□□□□ -1.45
CASP4P49662 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CASP4P49662 AC092451.3-201ENST00000625067 1343 ntBASIC5.99□□□□□ -1.45
CASP4P49662 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CASP4P49662 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CASP4P49662 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.98□□□□□ -1.45
CASP4P49662 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CASP4P49662 AC100757.1-201ENST00000616872 1835 ntBASIC5.98□□□□□ -1.45
CASP4P49662 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CASP4P49662 RNA5SP242-201ENST00000364171 118 ntBASIC5.98□□□□□ -1.45
CASP4P49662 RNU6-673P-201ENST00000365084 104 ntBASIC5.98□□□□□ -1.45
CASP4P49662 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.98□□□□□ -1.45
CASP4P49662 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.98□□□□□ -1.45
CASP4P49662 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.98□□□□□ -1.45
CASP4P49662 AL358876.1-201ENST00000453364 1075 ntBASIC5.98□□□□□ -1.45
CASP4P49662 AL035090.1-201ENST00000454835 332 ntBASIC5.98□□□□□ -1.45
CASP4P49662 AC104109.1-201ENST00000498563 436 ntBASIC5.98□□□□□ -1.45
CASP4P49662 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.98□□□□□ -1.45
CASP4P49662 NRBF2P4-201ENST00000520874 850 ntBASIC5.98□□□□□ -1.45
CASP4P49662 IGKV3D-34-201ENST00000522638 302 ntBASIC5.98□□□□□ -1.45
CASP4P49662 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
CASP4P49662 MIR4310-201ENST00000582950 57 ntBASIC5.98□□□□□ -1.45
CASP4P49662 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CASP4P49662 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.98□□□□□ -1.45
CASP4P49662 AC132068.1-201ENST00000623805 459 ntBASIC5.98□□□□□ -1.45
CASP4P49662 AC007683.2-201ENST00000624681 714 ntBASIC5.98□□□□□ -1.45
CASP4P49662 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CASP4P49662 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CASP4P49662 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CASP4P49662 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CASP4P49662 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CASP4P49662 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.98□□□□□ -1.45
CASP4P49662 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CASP4P49662 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.98□□□□□ -1.45
CASP4P49662 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CASP4P49662 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CASP4P49662 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CASP4P49662 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CASP4P49662 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CASP4P49662 LINC01963-201ENST00000562038 3148 ntBASIC5.97□□□□□ -1.45
CASP4P49662 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CASP4P49662 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CASP4P49662 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CASP4P49662 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CASP4P49662 RNA5SP234-201ENST00000363916 119 ntBASIC5.97□□□□□ -1.45
CASP4P49662 RN7SKP69-201ENST00000365390 305 ntBASIC5.97□□□□□ -1.45
CASP4P49662 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CASP4P49662 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CASP4P49662 SDHDP6-201ENST00000414693 480 ntBASIC5.97□□□□□ -1.45
CASP4P49662 AC009784.1-201ENST00000426484 460 ntBASIC5.97□□□□□ -1.45
CASP4P49662 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.97□□□□□ -1.45
CASP4P49662 RPS27AP2-201ENST00000457576 465 ntBASIC5.97□□□□□ -1.45
CASP4P49662 AC023141.9-201ENST00000458734 412 ntBASIC5.97□□□□□ -1.45
CASP4P49662 RPL35AP19-201ENST00000469425 329 ntBASIC5.97□□□□□ -1.45
CASP4P49662 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.97□□□□□ -1.45
CASP4P49662 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.97□□□□□ -1.45
CASP4P49662 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.97□□□□□ -1.45
CASP4P49662 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CASP4P49662 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.97□□□□□ -1.45
CASP4P49662 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.97□□□□□ -1.45
CASP4P49662 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms