Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC7.74□□□□□ -1.17
VARSP26640 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
VARSP26640 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
VARSP26640 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
VARSP26640 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
VARSP26640 FMO10P-201ENST00000455032 1493 ntBASIC7.74□□□□□ -1.17
VARSP26640 AC009948.5-201ENST00000624360 4406 ntBASIC7.74□□□□□ -1.17
VARSP26640 UGT2B26P-201ENST00000508672 1613 ntBASIC7.74□□□□□ -1.17
VARSP26640 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
VARSP26640 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
VARSP26640 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
VARSP26640 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
VARSP26640 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
VARSP26640 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.73□□□□□ -1.17
VARSP26640 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 AC051619.3-201ENST00000560646 2426 ntBASIC7.73□□□□□ -1.17
VARSP26640 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC7.73□□□□□ -1.17
VARSP26640 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
VARSP26640 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.73□□□□□ -1.17
VARSP26640 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
VARSP26640 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 AL022334.1-201ENST00000417397 1726 ntBASIC7.73□□□□□ -1.17
VARSP26640 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.73□□□□□ -1.17
VARSP26640 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 RNA5SP149-201ENST00000364952 92 ntBASIC7.73□□□□□ -1.17
VARSP26640 Y_RNA.459-201ENST00000384251 102 ntBASIC7.73□□□□□ -1.17
VARSP26640 AL161787.1-201ENST00000401543 174 ntBASIC7.73□□□□□ -1.17
VARSP26640 AL049693.1-201ENST00000402760 611 ntBASIC7.73□□□□□ -1.17
VARSP26640 NACAP7-201ENST00000407371 609 ntBASIC7.73□□□□□ -1.17
VARSP26640 RN7SKP59-201ENST00000410520 314 ntBASIC7.73□□□□□ -1.17
VARSP26640 CTSLP8-201ENST00000413075 967 ntBASIC7.73□□□□□ -1.17
VARSP26640 SNRPEP10-201ENST00000420249 274 ntBASIC7.73□□□□□ -1.17
VARSP26640 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC7.73□□□□□ -1.17
VARSP26640 Z98752.2-201ENST00000432727 312 ntBASIC7.73□□□□□ -1.17
VARSP26640 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC7.73□□□□□ -1.17
VARSP26640 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC7.73□□□□□ -1.17
VARSP26640 COX6CP18-201ENST00000448769 222 ntBASIC7.73□□□□□ -1.17
VARSP26640 GAPDHP17-201ENST00000449858 1001 ntBASIC7.73□□□□□ -1.17
VARSP26640 OR52I1-201ENST00000450052 1050 ntBASIC7.73□□□□□ -1.17
VARSP26640 ATP5G1P6-201ENST00000451206 412 ntBASIC7.73□□□□□ -1.17
VARSP26640 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC7.73□□□□□ -1.17
VARSP26640 AC130509.1-201ENST00000464158 433 ntBASIC7.73□□□□□ -1.17
VARSP26640 AC096741.1-201ENST00000472250 846 ntBASIC7.73□□□□□ -1.17
VARSP26640 AL928654.1-201ENST00000476081 354 ntBASIC7.73□□□□□ -1.17
VARSP26640 AC105910.1-201ENST00000482585 483 ntBASIC7.73□□□□□ -1.17
VARSP26640 THAP6-203ENST00000502620 582 ntTSL 3 BASIC7.73□□□□□ -1.17
VARSP26640 AC114981.1-201ENST00000503897 678 ntBASIC7.73□□□□□ -1.17
VARSP26640 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.73□□□□□ -1.17
VARSP26640 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC7.73□□□□□ -1.17
VARSP26640 CDC42P3-201ENST00000518493 633 ntBASIC7.73□□□□□ -1.17
VARSP26640 AP003122.4-201ENST00000530980 758 ntBASIC7.73□□□□□ -1.17
VARSP26640 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.73□□□□□ -1.17
VARSP26640 MRPL40P1-201ENST00000542687 604 ntBASIC7.73□□□□□ -1.17
VARSP26640 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC7.73□□□□□ -1.17
VARSP26640 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC7.73□□□□□ -1.17
VARSP26640 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC7.73□□□□□ -1.17
VARSP26640 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.73□□□□□ -1.17
VARSP26640 RN7SL785P-201ENST00000578437 253 ntBASIC7.73□□□□□ -1.17
VARSP26640 BOLA2P1-201ENST00000584794 232 ntBASIC7.73□□□□□ -1.17
VARSP26640 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC7.73□□□□□ -1.17
VARSP26640 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC7.73□□□□□ -1.17
VARSP26640 AC136443.5-201ENST00000603741 370 ntBASIC7.73□□□□□ -1.17
VARSP26640 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.73□□□□□ -1.17
VARSP26640 TEX41-265ENST00000627785 704 ntTSL 5 BASIC7.73□□□□□ -1.17
VARSP26640 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.73□□□□□ -1.17
VARSP26640 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 DDX11L16-201ENST00000507418 1306 ntBASIC7.73□□□□□ -1.17
VARSP26640 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC7.73□□□□□ -1.17
VARSP26640 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC7.73□□□□□ -1.17
VARSP26640 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VARSP26640 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.73□□□□□ -1.17
VARSP26640 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.72□□□□□ -1.17
VARSP26640 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.72□□□□□ -1.17
VARSP26640 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
VARSP26640 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.72□□□□□ -1.17
VARSP26640 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 BX322650.1-201ENST00000332359 2143 ntBASIC7.72□□□□□ -1.17
VARSP26640 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
VARSP26640 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARSP26640 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms