Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RN7SL290P-201ENST00000578661 300 ntBASIC6.09□□□□□ -1.43
TPM1P09493 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.09□□□□□ -1.43
TPM1P09493 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.09□□□□□ -1.43
TPM1P09493 AL356608.1-201ENST00000610034 820 ntBASIC6.09□□□□□ -1.43
TPM1P09493 MIR6823-201ENST00000622118 61 ntBASIC6.09□□□□□ -1.43
TPM1P09493 AC091932.2-201ENST00000623014 291 ntBASIC6.09□□□□□ -1.43
TPM1P09493 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.09□□□□□ -1.43
TPM1P09493 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
TPM1P09493 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
TPM1P09493 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TPM1P09493 ADAM5-202ENST00000399789 1942 ntBASIC6.09□□□□□ -1.44
TPM1P09493 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.44
TPM1P09493 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
TPM1P09493 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
TPM1P09493 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TPM1P09493 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TPM1P09493 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.08□□□□□ -1.44
TPM1P09493 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.08□□□□□ -1.44
TPM1P09493 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TPM1P09493 MIR130B-202ENST00000385018 82 ntBASIC6.08□□□□□ -1.44
TPM1P09493 SNORA48.4-201ENST00000391089 134 ntBASIC6.08□□□□□ -1.44
TPM1P09493 AL096711.1-201ENST00000404780 554 ntBASIC6.08□□□□□ -1.44
TPM1P09493 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.08□□□□□ -1.44
TPM1P09493 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.08□□□□□ -1.44
TPM1P09493 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.08□□□□□ -1.44
TPM1P09493 GAPDHP59-201ENST00000435908 267 ntBASIC6.08□□□□□ -1.44
TPM1P09493 AC064862.5-201ENST00000440618 334 ntBASIC6.08□□□□□ -1.44
TPM1P09493 RPL12P49-201ENST00000441100 121 ntBASIC6.08□□□□□ -1.44
TPM1P09493 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.08□□□□□ -1.44
TPM1P09493 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.08□□□□□ -1.44
TPM1P09493 AZGP1P2-201ENST00000454506 345 ntBASIC6.08□□□□□ -1.44
TPM1P09493 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.08□□□□□ -1.44
TPM1P09493 AC016559.2-201ENST00000510759 359 ntBASIC6.08□□□□□ -1.44
TPM1P09493 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.08□□□□□ -1.44
TPM1P09493 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.08□□□□□ -1.44
TPM1P09493 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.08□□□□□ -1.44
TPM1P09493 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.08□□□□□ -1.44
TPM1P09493 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
TPM1P09493 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.08□□□□□ -1.44
TPM1P09493 MIR3936-201ENST00000584304 110 ntBASIC6.08□□□□□ -1.44
TPM1P09493 AC092266.1-201ENST00000610958 165 ntBASIC6.08□□□□□ -1.44
TPM1P09493 MIR6793-201ENST00000612376 63 ntBASIC6.08□□□□□ -1.44
TPM1P09493 uc_338.31-201ENST00000615595 186 ntBASIC6.08□□□□□ -1.44
TPM1P09493 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TPM1P09493 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TPM1P09493 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.08□□□□□ -1.44
TPM1P09493 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TPM1P09493 AC132825.8-201ENST00000640783 297 ntBASIC6.08□□□□□ -1.44
TPM1P09493 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TPM1P09493 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.08□□□□□ -1.44
TPM1P09493 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TPM1P09493 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
TPM1P09493 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TPM1P09493 SMG1P4-204ENST00000523028 4131 ntBASIC6.08□□□□□ -1.44
TPM1P09493 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TPM1P09493 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.08□□□□□ -1.44
TPM1P09493 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TPM1P09493 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TPM1P09493 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
TPM1P09493 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.07□□□□□ -1.44
TPM1P09493 AC022417.1-201ENST00000624768 1303 ntBASIC6.07□□□□□ -1.44
TPM1P09493 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
TPM1P09493 AF287957.1-201ENST00000607368 1595 ntBASIC6.07□□□□□ -1.44
TPM1P09493 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TPM1P09493 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TPM1P09493 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
TPM1P09493 AL050305.1-201ENST00000399993 1230 ntBASIC6.07□□□□□ -1.44
TPM1P09493 MRPL53P1-201ENST00000414323 319 ntBASIC6.07□□□□□ -1.44
TPM1P09493 AL139158.1-201ENST00000424719 340 ntBASIC6.07□□□□□ -1.44
TPM1P09493 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.07□□□□□ -1.44
TPM1P09493 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.07□□□□□ -1.44
TPM1P09493 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.07□□□□□ -1.44
TPM1P09493 RPL29P23-201ENST00000486188 442 ntBASIC6.07□□□□□ -1.44
TPM1P09493 AC112484.3-201ENST00000505910 329 ntBASIC6.07□□□□□ -1.44
TPM1P09493 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.07□□□□□ -1.44
TPM1P09493 DUTP7-201ENST00000507982 486 ntBASIC6.07□□□□□ -1.44
TPM1P09493 GUSBP9-201ENST00000510138 584 ntBASIC6.07□□□□□ -1.44
TPM1P09493 AC091912.1-201ENST00000511351 248 ntBASIC6.07□□□□□ -1.44
TPM1P09493 HMGN2P36-201ENST00000529541 409 ntBASIC6.07□□□□□ -1.44
TPM1P09493 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.07□□□□□ -1.44
TPM1P09493 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.07□□□□□ -1.44
TPM1P09493 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.07□□□□□ -1.44
TPM1P09493 AC007956.1-201ENST00000555623 542 ntBASIC6.07□□□□□ -1.44
TPM1P09493 AL356801.1-201ENST00000559320 294 ntBASIC6.07□□□□□ -1.44
TPM1P09493 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.07□□□□□ -1.44
TPM1P09493 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.07□□□□□ -1.44
TPM1P09493 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.07□□□□□ -1.44
TPM1P09493 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.07□□□□□ -1.44
TPM1P09493 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.07□□□□□ -1.44
TPM1P09493 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TPM1P09493 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TPM1P09493 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TPM1P09493 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TPM1P09493 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.07□□□□□ -1.44
TPM1P09493 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TPM1P09493 AL354854.1-201ENST00000455940 1363 ntBASIC6.06□□□□□ -1.44
TPM1P09493 CASC19-248ENST00000641674 1356 ntBASIC6.06□□□□□ -1.44
TPM1P09493 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TPM1P09493 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
TPM1P09493 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms