Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AL450023.2-201ENST00000453276 545 ntBASIC10.48□□□□□ -0.73
MYCNP04198 HIST1H2APS5-201ENST00000454320 369 ntBASIC10.48□□□□□ -0.73
MYCNP04198 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC10.48□□□□□ -0.73
MYCNP04198 FLVCR2-202ENST00000539311 1221 ntTSL 2 BASIC10.48□□□□□ -0.73
MYCNP04198 FLT1-205ENST00000543394 1275 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
MYCNP04198 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC10.48□□□□□ -0.73
MYCNP04198 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC10.48□□□□□ -0.73
MYCNP04198 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC10.48□□□□□ -0.73
MYCNP04198 LINC01834-201ENST00000567374 385 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
MYCNP04198 RN7SL531P-201ENST00000578464 282 ntBASIC10.48□□□□□ -0.73
MYCNP04198 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC10.48□□□□□ -0.73
MYCNP04198 AC005899.2-201ENST00000584353 90 ntBASIC10.48□□□□□ -0.73
MYCNP04198 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC10.48□□□□□ -0.73
MYCNP04198 MIR6083-201ENST00000612737 106 ntBASIC10.48□□□□□ -0.73
MYCNP04198 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC10.48□□□□□ -0.73
MYCNP04198 FLT1-208ENST00000617835 434 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
MYCNP04198 AC004696.2-201ENST00000624022 331 ntTSL 3 BASIC10.48□□□□□ -0.73
MYCNP04198 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC10.48□□□□□ -0.73
MYCNP04198 AC027559.1-201ENST00000636288 271 ntBASIC10.48□□□□□ -0.73
MYCNP04198 PARP4P1-201ENST00000435945 2337 ntBASIC10.48□□□□□ -0.73
MYCNP04198 SLC17A1-201ENST00000244527 1844 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
MYCNP04198 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
MYCNP04198 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
MYCNP04198 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC10.48□□□□□ -0.73
MYCNP04198 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC10.48□□□□□ -0.73
MYCNP04198 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
MYCNP04198 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
MYCNP04198 GPN1-202ENST00000407583 1395 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
MYCNP04198 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
MYCNP04198 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC10.48□□□□□ -0.73
MYCNP04198 POLR2D-201ENST00000272645 5042 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
MYCNP04198 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC10.48□□□□□ -0.73
MYCNP04198 LIAS-222ENST00000640888 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
MYCNP04198 BTN3A1-202ENST00000289361 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
MYCNP04198 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC10.48□□□□□ -0.73
MYCNP04198 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
MYCNP04198 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 MRPS33-201ENST00000324787 4241 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 MFSD8-259ENST00000642042 2303 ntBASIC10.47□□□□□ -0.73
MYCNP04198 TRPC3-201ENST00000264811 3675 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 FOXP1-220ENST00000614176 6384 ntAPPRIS ALT1 TSL 2 BASIC10.47□□□□□ -0.73
MYCNP04198 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 PPM1A-201ENST00000325642 1713 ntTSL 2 BASIC10.47□□□□□ -0.73
MYCNP04198 MSRA-210ENST00000528246 1706 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 OR11A1-202ENST00000377148 2482 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
MYCNP04198 SEPT4-206ENST00000457347 1795 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
MYCNP04198 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
MYCNP04198 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
MYCNP04198 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC10.47□□□□□ -0.73
MYCNP04198 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 AC024610.2-204ENST00000637478 2867 ntTSL 5 BASIC10.47□□□□□ -0.73
MYCNP04198 AL049833.3-201ENST00000623920 3738 ntBASIC10.47□□□□□ -0.73
MYCNP04198 AC240565.2-201ENST00000623180 2096 ntTSL 5 BASIC10.47□□□□□ -0.73
MYCNP04198 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
MYCNP04198 Y_RNA.19-201ENST00000362462 99 ntBASIC10.47□□□□□ -0.73
MYCNP04198 RNA5SP219-201ENST00000390940 113 ntBASIC10.47□□□□□ -0.73
MYCNP04198 AL671883.1-201ENST00000421191 306 ntBASIC10.47□□□□□ -0.73
MYCNP04198 RPSAP10-201ENST00000426103 878 ntBASIC10.47□□□□□ -0.73
MYCNP04198 AL008638.1-201ENST00000430468 473 ntTSL 2 BASIC10.47□□□□□ -0.73
MYCNP04198 RPL23AP74-201ENST00000437246 471 ntBASIC10.47□□□□□ -0.73
MYCNP04198 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 RN7SL401P-201ENST00000470065 298 ntBASIC10.47□□□□□ -0.73
MYCNP04198 DEFB109F-201ENST00000491870 277 ntBASIC10.47□□□□□ -0.73
MYCNP04198 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC10.47□□□□□ -0.73
MYCNP04198 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC10.47□□□□□ -0.73
MYCNP04198 AC109481.1-201ENST00000509173 282 ntBASIC10.47□□□□□ -0.73
MYCNP04198 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC10.47□□□□□ -0.73
MYCNP04198 MTND6P20-201ENST00000522986 418 ntBASIC10.47□□□□□ -0.73
MYCNP04198 AP003170.1-201ENST00000536944 1030 ntBASIC10.47□□□□□ -0.73
MYCNP04198 ULK4P3-201ENST00000563895 440 ntBASIC10.47□□□□□ -0.73
MYCNP04198 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC10.47□□□□□ -0.73
MYCNP04198 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC10.47□□□□□ -0.73
MYCNP04198 MIR5003-201ENST00000581891 99 ntBASIC10.47□□□□□ -0.73
MYCNP04198 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC10.47□□□□□ -0.73
MYCNP04198 AC020910.3-201ENST00000603701 874 ntBASIC10.47□□□□□ -0.73
MYCNP04198 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 AC004832.4-201ENST00000608952 331 ntBASIC10.47□□□□□ -0.73
MYCNP04198 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC10.47□□□□□ -0.73
MYCNP04198 MIR7973-1-201ENST00000614683 76 ntBASIC10.47□□□□□ -0.73
MYCNP04198 AL591926.6-201ENST00000617375 415 ntBASIC10.47□□□□□ -0.73
MYCNP04198 Metazoa_SRP.190-201ENST00000620330 287 ntBASIC10.47□□□□□ -0.73
MYCNP04198 AC022034.2-201ENST00000426023 2387 ntTSL 2 BASIC10.47□□□□□ -0.73
MYCNP04198 EEF1A1P2-201ENST00000553854 1447 ntBASIC10.47□□□□□ -0.73
MYCNP04198 POP4-202ENST00000585603 3385 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 VSIG4-202ENST00000412866 1474 ntTSL 2 BASIC10.47□□□□□ -0.73
MYCNP04198 PSG11-202ENST00000320078 1575 ntAPPRIS P2 TSL 2 BASIC10.47□□□□□ -0.73
MYCNP04198 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 CD44-210ENST00000434472 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 HTR3B-202ENST00000537778 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 ZSCAN25-202ENST00000334715 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
MYCNP04198 NPHP1-202ENST00000355301 1932 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
MYCNP04198 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms