Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.26□□□□□ -1.89
APOBP04114 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
APOBP04114 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.26□□□□□ -1.89
APOBP04114 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC3.26□□□□□ -1.89
APOBP04114 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC3.26□□□□□ -1.89
APOBP04114 AC119674.1-213ENST00000641177 1386 ntBASIC3.26□□□□□ -1.89
APOBP04114 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC3.26□□□□□ -1.89
APOBP04114 RNU1-74P-201ENST00000384108 171 ntBASIC3.26□□□□□ -1.89
APOBP04114 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.26□□□□□ -1.89
APOBP04114 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC3.26□□□□□ -1.89
APOBP04114 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC3.26□□□□□ -1.89
APOBP04114 AC079922.1-201ENST00000443291 359 ntBASIC3.26□□□□□ -1.89
APOBP04114 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.26□□□□□ -1.89
APOBP04114 RN7SL423P-201ENST00000486202 304 ntBASIC3.26□□□□□ -1.89
APOBP04114 AC109635.6-201ENST00000525487 1113 ntBASIC3.26□□□□□ -1.89
APOBP04114 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC3.26□□□□□ -1.89
APOBP04114 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.26□□□□□ -1.89
APOBP04114 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.26□□□□□ -1.89
APOBP04114 AC019193.2-201ENST00000610012 634 ntBASIC3.26□□□□□ -1.89
APOBP04114 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC3.26□□□□□ -1.89
APOBP04114 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
APOBP04114 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC3.26□□□□□ -1.89
APOBP04114 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC3.26□□□□□ -1.89
APOBP04114 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.26□□□□□ -1.89
APOBP04114 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC3.26□□□□□ -1.89
APOBP04114 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC3.26□□□□□ -1.89
APOBP04114 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
APOBP04114 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC3.26□□□□□ -1.89
APOBP04114 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC3.26□□□□□ -1.89
APOBP04114 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
APOBP04114 RNU4-25P-201ENST00000410569 230 ntBASIC3.26□□□□□ -1.89
APOBP04114 CHEK2P3-201ENST00000416118 248 ntBASIC3.26□□□□□ -1.89
APOBP04114 VN1R21P-201ENST00000426703 765 ntBASIC3.26□□□□□ -1.89
APOBP04114 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC3.26□□□□□ -1.89
APOBP04114 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC3.26□□□□□ -1.89
APOBP04114 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.26□□□□□ -1.89
APOBP04114 AC010733.1-201ENST00000451515 401 ntBASIC3.26□□□□□ -1.89
APOBP04114 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC3.26□□□□□ -1.89
APOBP04114 AC091167.1-201ENST00000492017 396 ntBASIC3.26□□□□□ -1.89
APOBP04114 AC137627.1-201ENST00000545761 289 ntBASIC3.26□□□□□ -1.89
APOBP04114 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
APOBP04114 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC3.26□□□□□ -1.89
APOBP04114 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 AC003973.3-201ENST00000624863 2822 ntBASIC3.26□□□□□ -1.89
APOBP04114 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 OR9G4-201ENST00000302957 984 ntBASIC3.26□□□□□ -1.89
APOBP04114 GAPDHP15-201ENST00000398586 975 ntBASIC3.26□□□□□ -1.89
APOBP04114 AF186996.5-201ENST00000418098 904 ntBASIC3.26□□□□□ -1.89
APOBP04114 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC3.26□□□□□ -1.89
APOBP04114 AL645608.4-201ENST00000423619 154 ntBASIC3.26□□□□□ -1.89
APOBP04114 RPL23AP1-201ENST00000428990 471 ntBASIC3.26□□□□□ -1.89
APOBP04114 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
APOBP04114 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.26□□□□□ -1.89
APOBP04114 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.26□□□□□ -1.89
APOBP04114 AL163952.1-202ENST00000569625 600 ntBASIC3.26□□□□□ -1.89
APOBP04114 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
APOBP04114 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC3.25□□□□□ -1.89
APOBP04114 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC3.25□□□□□ -1.89
APOBP04114 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
APOBP04114 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
APOBP04114 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
APOBP04114 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
APOBP04114 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
APOBP04114 FBN2-208ENST00000619499 10154 ntTSL 5 BASIC3.25□□□□□ -1.89
APOBP04114 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
APOBP04114 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
APOBP04114 OR9K1P-202ENST00000641111 3217 ntBASIC3.25□□□□□ -1.89
APOBP04114 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
APOBP04114 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
APOBP04114 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC3.25□□□□□ -1.89
APOBP04114 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC3.25□□□□□ -1.89
APOBP04114 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
APOBP04114 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.25□□□□□ -1.89
APOBP04114 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
APOBP04114 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
APOBP04114 RNA5-8SP5-201ENST00000365304 152 ntBASIC3.25□□□□□ -1.89
APOBP04114 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
APOBP04114 BMS1P19-201ENST00000433925 393 ntBASIC3.25□□□□□ -1.89
APOBP04114 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
APOBP04114 TRBV5-2-201ENST00000489095 273 ntBASIC3.25□□□□□ -1.89
APOBP04114 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC3.25□□□□□ -1.89
APOBP04114 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.25□□□□□ -1.89
APOBP04114 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.25□□□□□ -1.89
APOBP04114 AGGF1P7-201ENST00000562369 913 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms