Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 RNA5SP77-201ENST00000365394 120 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 RNA5SP279-201ENST00000365513 117 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 RNU6-452P-201ENST00000384406 107 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 RNU6-906P-201ENST00000384700 70 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 GAPDHP15-201ENST00000398586 975 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AL034374.1-201ENST00000406329 351 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 RNA5SP115-201ENST00000411160 107 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AL359092.1-201ENST00000417156 265 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 MTCO2P21-201ENST00000419780 677 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 RPS4XP16-201ENST00000427198 791 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 RPL5P2-201ENST00000429598 854 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 OR10R1P-201ENST00000441524 1141 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 TRY2P-201ENST00000448860 689 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AC023050.1-201ENST00000498198 304 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AC010627.1-201ENST00000503819 1294 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AC018645.1-201ENST00000505003 109 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 BOLA3P3-201ENST00000505182 232 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 HPRT1P1-201ENST00000509498 657 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AC008837.1-201ENST00000511513 412 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 SCARNA5-201ENST00000516201 276 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 CYCSP25-201ENST00000525280 316 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 NDUFS5P6-201ENST00000529136 295 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AC106785.4-201ENST00000569492 412 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 SS18L2P2-201ENST00000583960 235 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AC079315.1-201ENST00000602952 623 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 FRG1HP-204ENST00000617940 757 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AC012653.2-201ENST00000621880 420 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AC018659.2-201ENST00000624690 715 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 RLIMP2-201ENST00000427891 1563 ntBASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
PCDHGA6Q9Y5G7 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 DOCK11P1-201ENST00000553480 5932 ntBASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 RNU6-185P-201ENST00000384421 107 ntBASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 MIR188-201ENST00000385034 86 ntBASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 YWHAZP6-201ENST00000399764 738 ntBASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 AP002530.1-201ENST00000405705 684 ntBASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 AC083862.1-201ENST00000427378 1242 ntBASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 PSMD10P2-201ENST00000432890 672 ntBASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 AL353093.1-201ENST00000441292 436 ntBASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHGA6Q9Y5G7 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms