Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 MIR1203-201ENST00000408812 85 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AL022331.1-201ENST00000429025 477 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 RPL7AP49-201ENST00000429522 581 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AL591438.1-201ENST00000433508 581 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AC090804.1-201ENST00000448870 490 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AC073476.1-201ENST00000452854 407 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AC022215.1-201ENST00000481770 362 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 LSM3P4-201ENST00000502948 309 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 OR5H7P-201ENST00000514084 930 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AP000648.1-201ENST00000529682 397 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AC084121.1-201ENST00000533882 835 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 OR11H3P-201ENST00000554547 982 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AL845552.1-201ENST00000556820 323 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 ARGFXP2-201ENST00000579304 949 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 MIR4660-201ENST00000583549 74 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AL031601.1-201ENST00000605702 394 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AC135068.5-201ENST00000624197 983 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AC132825.8-201ENST00000640783 297 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AC073869.8-201ENST00000641806 335 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 AL034549.2-201ENST00000618285 3373 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 U3.7-201ENST00000363668 216 ntBASIC5.2□□□□□ -1.58
VAPAQ9P0L0 MIR1275-201ENST00000408770 80 ntBASIC5.2□□□□□ -1.58
VAPAQ9P0L0 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 HMGB3P24-201ENST00000433260 622 ntBASIC5.2□□□□□ -1.58
VAPAQ9P0L0 TIMM8BP2-201ENST00000445940 251 ntBASIC5.2□□□□□ -1.58
VAPAQ9P0L0 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 RPS23P6-201ENST00000466136 431 ntBASIC5.2□□□□□ -1.58
VAPAQ9P0L0 NENFP3-201ENST00000503735 313 ntBASIC5.2□□□□□ -1.58
VAPAQ9P0L0 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 HMGN1P9-201ENST00000515212 298 ntBASIC5.2□□□□□ -1.58
VAPAQ9P0L0 FTH1P11-201ENST00000517577 551 ntBASIC5.2□□□□□ -1.58
VAPAQ9P0L0 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 AL359219.2-201ENST00000555184 348 ntBASIC5.2□□□□□ -1.58
VAPAQ9P0L0 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 FRG1EP-201ENST00000634469 770 ntBASIC5.2□□□□□ -1.58
VAPAQ9P0L0 CASC19-274ENST00000642018 970 ntBASIC5.2□□□□□ -1.58
VAPAQ9P0L0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 AL360270.2-201ENST00000562952 5985 ntBASIC5.2□□□□□ -1.58
VAPAQ9P0L0 HSPA8P14-201ENST00000552265 1805 ntBASIC5.2□□□□□ -1.58
VAPAQ9P0L0 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 AL603750.1-201ENST00000624216 1717 ntBASIC5.2□□□□□ -1.58
VAPAQ9P0L0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VAPAQ9P0L0 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.19□□□□□ -1.58
VAPAQ9P0L0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 HSPD1P12-201ENST00000429127 1069 ntBASIC5.19□□□□□ -1.58
VAPAQ9P0L0 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms