Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC074029.2-201ENST00000551045 634 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC027281.1-201ENST00000574178 758 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC090236.2-201ENST00000587933 1101 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC008521.2-201ENST00000591021 259 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC006115.2-201ENST00000596823 202 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC011445.2-201ENST00000599274 173 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AL356608.1-201ENST00000610034 820 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AL163051.2-201ENST00000618976 735 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC129915.3-201ENST00000634128 948 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 DDX6P1-205ENST00000441966 1436 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC120036.2-201ENST00000509729 1474 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 KARSP1-201ENST00000451871 1752 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 ICE2P1-201ENST00000512800 1849 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 RNA5SP211-201ENST00000365516 117 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AL132875.1-201ENST00000403623 949 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 RPL35AP3-201ENST00000414680 288 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AC096644.3-201ENST00000416788 338 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AL590399.2-201ENST00000427536 309 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 RPL23AP19-201ENST00000436229 369 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 RPS12P17-201ENST00000438591 377 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 KRT8P51-201ENST00000438938 274 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 TRIM60P16-201ENST00000444048 694 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 ATP5G1P3-201ENST00000463301 410 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 TPT1P8-201ENST00000510120 555 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 RNU6-491P-201ENST00000516099 110 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AC138701.1-201ENST00000524329 714 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 MTND2P17-201ENST00000550281 688 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 CKS1BP1-201ENST00000555221 240 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 RPA2P1-201ENST00000556557 721 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AC015911.5-201ENST00000587076 451 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AC100767.2-201ENST00000604840 693 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AL078595.2-201ENST00000605309 1780 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AL450270.1-201ENST00000606160 391 ntBASIC6.12□□□□□ -1.43
USP29Q9HBJ7 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.12□□□□□ -1.43
USP29Q9HBJ7 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 CUL4AP1-201ENST00000514750 1863 ntBASIC6.11□□□□□ -1.43
USP29Q9HBJ7 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USP29Q9HBJ7 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms