Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DDX1Q92499 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
DDX1Q92499 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.87□□□□□ -1.31
DDX1Q92499 AC005702.3-201ENST00000585345 1447 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.87□□□□□ -1.31
DDX1Q92499 NEPNP-201ENST00000404786 1371 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
DDX1Q92499 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
DDX1Q92499 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.87□□□□□ -1.31
DDX1Q92499 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DDX1Q92499 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
DDX1Q92499 AL096711.1-201ENST00000404780 554 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 U3.43-201ENST00000410734 213 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.87□□□□□ -1.31
DDX1Q92499 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC6.87□□□□□ -1.31
DDX1Q92499 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.87□□□□□ -1.31
DDX1Q92499 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.87□□□□□ -1.31
DDX1Q92499 AC093422.3-201ENST00000428506 305 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 RPS29P14-201ENST00000431518 171 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 GSTA7P-201ENST00000438425 448 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 SNRPFP2-201ENST00000440710 251 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 MTCO1P53-201ENST00000441633 699 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 AC023512.1-201ENST00000444513 499 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC6.87□□□□□ -1.31
DDX1Q92499 AC004263.1-201ENST00000479327 332 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.87□□□□□ -1.31
DDX1Q92499 AC091965.3-201ENST00000506236 208 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DDX1Q92499 ASNSP4-201ENST00000511103 447 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.87□□□□□ -1.31
DDX1Q92499 RNU5A-4P-201ENST00000516588 111 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 NRON-201ENST00000517270 370 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 MTCYBP19-201ENST00000517463 1124 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 AC091163.3-201ENST00000518269 1144 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.87□□□□□ -1.31
DDX1Q92499 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.87□□□□□ -1.31
DDX1Q92499 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.87□□□□□ -1.31
DDX1Q92499 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.87□□□□□ -1.31
DDX1Q92499 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.87□□□□□ -1.31
DDX1Q92499 RN7SL475P-201ENST00000583379 298 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.87□□□□□ -1.31
DDX1Q92499 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.87□□□□□ -1.31
DDX1Q92499 AC024255.1-201ENST00000614376 102 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 AC021755.4-201ENST00000616620 456 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.87□□□□□ -1.31
DDX1Q92499 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.87□□□□□ -1.31
DDX1Q92499 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.87□□□□□ -1.31
DDX1Q92499 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
DDX1Q92499 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DDX1Q92499 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DDX1Q92499 CUBNP3-201ENST00000457461 1784 ntBASIC6.87□□□□□ -1.31
DDX1Q92499 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DDX1Q92499 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
DDX1Q92499 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.87□□□□□ -1.31
DDX1Q92499 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
DDX1Q92499 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DDX1Q92499 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DDX1Q92499 AL353743.3-201ENST00000442109 1468 ntBASIC6.86□□□□□ -1.31
DDX1Q92499 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
DDX1Q92499 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
DDX1Q92499 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
DDX1Q92499 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
DDX1Q92499 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.86□□□□□ -1.31
DDX1Q92499 MTND4P8-201ENST00000514997 1362 ntBASIC6.86□□□□□ -1.31
DDX1Q92499 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
DDX1Q92499 PRNCR1-201ENST00000635449 12727 ntBASIC6.86□□□□□ -1.31
DDX1Q92499 AC007342.7-201ENST00000624610 2337 ntBASIC6.86□□□□□ -1.31
DDX1Q92499 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
DDX1Q92499 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.86□□□□□ -1.31
DDX1Q92499 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
DDX1Q92499 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
DDX1Q92499 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.86□□□□□ -1.31
DDX1Q92499 MRPS21P5-201ENST00000417885 231 ntBASIC6.86□□□□□ -1.31
DDX1Q92499 AC006065.1-201ENST00000422539 802 ntBASIC6.86□□□□□ -1.31
DDX1Q92499 PNRC2P1-201ENST00000423940 420 ntBASIC6.86□□□□□ -1.31
DDX1Q92499 AC099782.1-201ENST00000425889 474 ntBASIC6.86□□□□□ -1.31
DDX1Q92499 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
DDX1Q92499 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6.86□□□□□ -1.31
DDX1Q92499 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC6.86□□□□□ -1.31
DDX1Q92499 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.86□□□□□ -1.31
DDX1Q92499 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.86□□□□□ -1.31
DDX1Q92499 LRRC37A14P-201ENST00000452297 462 ntBASIC6.86□□□□□ -1.31
DDX1Q92499 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
DDX1Q92499 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC6.86□□□□□ -1.31
DDX1Q92499 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.86□□□□□ -1.31
DDX1Q92499 AC022206.1-201ENST00000495947 347 ntBASIC6.86□□□□□ -1.31
DDX1Q92499 OR2A20P-203ENST00000498397 1268 ntBASIC6.86□□□□□ -1.31
DDX1Q92499 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.86□□□□□ -1.31
DDX1Q92499 AC018645.1-201ENST00000505003 109 ntBASIC6.86□□□□□ -1.31
DDX1Q92499 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.86□□□□□ -1.31
DDX1Q92499 GAPDHP71-201ENST00000511530 1003 ntBASIC6.86□□□□□ -1.31
DDX1Q92499 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.86□□□□□ -1.31
DDX1Q92499 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.86□□□□□ -1.31
DDX1Q92499 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC6.86□□□□□ -1.31
DDX1Q92499 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.86□□□□□ -1.31
DDX1Q92499 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.86□□□□□ -1.31
DDX1Q92499 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
DDX1Q92499 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC6.86□□□□□ -1.31
DDX1Q92499 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.86□□□□□ -1.31
DDX1Q92499 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms