Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 NDUFB4P12-201ENST00000513465 390 ntBASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 OR52H2P-201ENST00000514607 902 ntBASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 RN7SKP244-201ENST00000516513 307 ntBASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 Y_RNA.701-201ENST00000516812 110 ntBASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 AC022832.1-201ENST00000530718 645 ntBASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 BTG1P1-201ENST00000540396 508 ntBASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 AC090286.3-201ENST00000573133 187 ntBASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 AC091805.2-201ENST00000603848 235 ntBASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 AC087468.1-201ENST00000604365 630 ntBASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 AC124312.5-201ENST00000604451 268 ntBASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 AC006270.3-201ENST00000605967 1036 ntBASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 AC091768.1-201ENST00000609258 930 ntBASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 AL138478.1-201ENST00000612252 832 ntBASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 AC010205.1-201ENST00000616668 449 ntBASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 AC024614.3-201ENST00000637860 256 ntBASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.92□□□□□ -1.14
NEDD1Q8NHV4 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 RNU6-481P-201ENST00000384194 107 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 FGF7P8-201ENST00000402994 292 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AL359694.1-201ENST00000403247 604 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AL590084.1-201ENST00000407885 387 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AL663061.1-201ENST00000416625 580 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 USP9YP18-201ENST00000425912 695 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 USP9YP9-201ENST00000429406 715 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 MTND1P32-201ENST00000433043 938 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 RPL22P17-201ENST00000438729 315 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 CRYGGP-201ENST00000443337 145 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 CCNJP1-201ENST00000450600 1149 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 PGBD4P1-201ENST00000473644 407 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 RPL30P6-201ENST00000475925 342 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 TPT1P3-201ENST00000492841 512 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 DSTNP2-201ENST00000504533 515 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AL390198.2-201ENST00000510553 222 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AC011352.2-201ENST00000514574 1016 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 RNU6-889P-201ENST00000517189 103 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AC011270.1-201ENST00000558606 583 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AC090578.1-201ENST00000604955 591 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AL390877.1-201ENST00000605704 214 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AL390208.1-201ENST00000605885 644 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AC009704.2-201ENST00000618739 483 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AC007603.3-201ENST00000636915 979 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 RBPJP6-201ENST00000411556 1431 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 ENO1P4-201ENST00000416471 1785 ntBASIC7.91□□□□□ -1.14
NEDD1Q8NHV4 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms