Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
VPS8Q8N3P4 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC8.44□□□□□ -1.06
VPS8Q8N3P4 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC8.44□□□□□ -1.06
VPS8Q8N3P4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC8.44□□□□□ -1.06
VPS8Q8N3P4 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS8Q8N3P4 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC8.44□□□□□ -1.06
VPS8Q8N3P4 GLUD1P3-202ENST00000508551 200 ntBASIC8.44□□□□□ -1.06
VPS8Q8N3P4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC8.44□□□□□ -1.06
VPS8Q8N3P4 AC119501.1-201ENST00000603646 475 ntBASIC8.44□□□□□ -1.06
VPS8Q8N3P4 AL139407.1-201ENST00000613826 1175 ntBASIC8.44□□□□□ -1.06
VPS8Q8N3P4 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC8.44□□□□□ -1.06
VPS8Q8N3P4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
VPS8Q8N3P4 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS8Q8N3P4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS8Q8N3P4 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
VPS8Q8N3P4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VPS8Q8N3P4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
VPS8Q8N3P4 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VPS8Q8N3P4 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VPS8Q8N3P4 DUTP5-201ENST00000406790 469 ntBASIC8.43□□□□□ -1.06
VPS8Q8N3P4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC8.43□□□□□ -1.06
VPS8Q8N3P4 AC005033.1-201ENST00000428904 813 ntBASIC8.43□□□□□ -1.06
VPS8Q8N3P4 FAM96AP1-201ENST00000430879 482 ntBASIC8.43□□□□□ -1.06
VPS8Q8N3P4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC8.43□□□□□ -1.06
VPS8Q8N3P4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC8.43□□□□□ -1.06
VPS8Q8N3P4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC8.43□□□□□ -1.06
VPS8Q8N3P4 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC8.43□□□□□ -1.06
VPS8Q8N3P4 AL138960.1-201ENST00000613838 513 ntBASIC8.43□□□□□ -1.06
VPS8Q8N3P4 AC003973.3-201ENST00000624863 2822 ntBASIC8.43□□□□□ -1.06
VPS8Q8N3P4 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
VPS8Q8N3P4 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC8.43□□□□□ -1.06
VPS8Q8N3P4 AC015799.1-201ENST00000622996 3122 ntBASIC8.43□□□□□ -1.06
VPS8Q8N3P4 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.42□□□□□ -1.06
VPS8Q8N3P4 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS8Q8N3P4 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS8Q8N3P4 U8.4-201ENST00000363626 134 ntBASIC8.42□□□□□ -1.06
VPS8Q8N3P4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC8.42□□□□□ -1.06
VPS8Q8N3P4 AURKAPS1-201ENST00000451805 1212 ntBASIC8.42□□□□□ -1.06
VPS8Q8N3P4 AL606490.1-201ENST00000452266 765 ntBASIC8.42□□□□□ -1.06
VPS8Q8N3P4 AC079168.1-201ENST00000458741 345 ntBASIC8.42□□□□□ -1.06
VPS8Q8N3P4 CBX1P5-201ENST00000475330 559 ntBASIC8.42□□□□□ -1.06
VPS8Q8N3P4 AC079841.1-201ENST00000481228 950 ntBASIC8.42□□□□□ -1.06
VPS8Q8N3P4 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC8.42□□□□□ -1.06
VPS8Q8N3P4 RNA5SP92-201ENST00000516437 110 ntBASIC8.42□□□□□ -1.06
VPS8Q8N3P4 AC130364.2-201ENST00000528639 604 ntBASIC8.42□□□□□ -1.06
VPS8Q8N3P4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC8.42□□□□□ -1.06
VPS8Q8N3P4 AC024940.3-201ENST00000538551 316 ntBASIC8.42□□□□□ -1.06
VPS8Q8N3P4 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC8.42□□□□□ -1.06
VPS8Q8N3P4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC8.42□□□□□ -1.06
VPS8Q8N3P4 PDCD6IPP2-207ENST00000566321 1069 ntBASIC8.42□□□□□ -1.06
VPS8Q8N3P4 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC8.42□□□□□ -1.06
VPS8Q8N3P4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC8.42□□□□□ -1.06
VPS8Q8N3P4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC8.42□□□□□ -1.06
VPS8Q8N3P4 AP002505.2-201ENST00000623585 696 ntBASIC8.42□□□□□ -1.06
VPS8Q8N3P4 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
VPS8Q8N3P4 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS8Q8N3P4 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VPS8Q8N3P4 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VPS8Q8N3P4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS8Q8N3P4 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS8Q8N3P4 U3.3-201ENST00000362986 216 ntBASIC8.41□□□□□ -1.06
VPS8Q8N3P4 AC124944.2-201ENST00000429866 1242 ntBASIC8.41□□□□□ -1.06
VPS8Q8N3P4 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS8Q8N3P4 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC8.41□□□□□ -1.06
VPS8Q8N3P4 AC072052.1-201ENST00000496556 306 ntBASIC8.41□□□□□ -1.06
VPS8Q8N3P4 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC8.41□□□□□ -1.06
VPS8Q8N3P4 AC093763.2-201ENST00000505334 1223 ntBASIC8.41□□□□□ -1.06
VPS8Q8N3P4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS8Q8N3P4 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
VPS8Q8N3P4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS8Q8N3P4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC8.41□□□□□ -1.06
VPS8Q8N3P4 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS8Q8N3P4 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC8.41□□□□□ -1.06
VPS8Q8N3P4 AC016769.4-201ENST00000616893 535 ntBASIC8.41□□□□□ -1.06
VPS8Q8N3P4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
VPS8Q8N3P4 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VPS8Q8N3P4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC8.41□□□□□ -1.06
VPS8Q8N3P4 AC073342.2-201ENST00000595842 1800 ntBASIC8.41□□□□□ -1.06
VPS8Q8N3P4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS8Q8N3P4 AC011493.1-201ENST00000596753 1632 ntBASIC8.4□□□□□ -1.06
VPS8Q8N3P4 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS8Q8N3P4 AL033543.1-201ENST00000623440 13454 ntBASIC8.4□□□□□ -1.06
VPS8Q8N3P4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS8Q8N3P4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS8Q8N3P4 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS8Q8N3P4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS8Q8N3P4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
VPS8Q8N3P4 TEX41-206ENST00000432608 661 ntTSL 3 BASIC8.4□□□□□ -1.06
VPS8Q8N3P4 EEF1B2P5-201ENST00000444820 548 ntBASIC8.4□□□□□ -1.06
VPS8Q8N3P4 AL389915.2-201ENST00000454576 441 ntBASIC8.4□□□□□ -1.06
VPS8Q8N3P4 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.4□□□□□ -1.06
VPS8Q8N3P4 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC8.4□□□□□ -1.06
VPS8Q8N3P4 AC079064.1-201ENST00000528365 362 ntBASIC8.4□□□□□ -1.06
VPS8Q8N3P4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC8.4□□□□□ -1.06
VPS8Q8N3P4 AC013244.1-201ENST00000604279 193 ntBASIC8.4□□□□□ -1.06
VPS8Q8N3P4 AP005432.2-201ENST00000608162 586 ntBASIC8.4□□□□□ -1.06
VPS8Q8N3P4 SDR42E1P1-201ENST00000611327 477 ntBASIC8.4□□□□□ -1.06
VPS8Q8N3P4 AP003400.3-201ENST00000624904 346 ntBASIC8.4□□□□□ -1.06
VPS8Q8N3P4 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS8Q8N3P4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms