Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 AC007956.1-201ENST00000555623 542 ntBASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 AL356801.1-201ENST00000559320 294 ntBASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 CYCSP38-201ENST00000559840 322 ntBASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 AC084373.1-201ENST00000603311 235 ntBASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 AL445670.1-201ENST00000618889 801 ntBASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 Z95114.1-201ENST00000624264 14574 ntBASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 CASC19-281ENST00000642118 1554 ntBASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
NHLRC1Q6VVB1 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC097063.1-201ENST00000426714 1797 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 VPS35P1-201ENST00000563400 1518 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 RNU1-150P-201ENST00000362491 162 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 U3.10-201ENST00000364459 214 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 RN7SKP78-201ENST00000364711 318 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC016739.1-201ENST00000405359 345 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AMZ2P2-201ENST00000406819 1057 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 RN7SKP279-201ENST00000411383 298 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 GAPDHP48-201ENST00000436626 961 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AMYP1-201ENST00000440059 1023 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 ATP5LP2-201ENST00000440646 311 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 HMGB1P47-201ENST00000511281 589 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 RN7SKP238-201ENST00000516483 249 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 RN7SKP70-201ENST00000516655 271 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC090424.1-201ENST00000535243 736 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC079905.1-201ENST00000549280 475 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC107958.1-201ENST00000556576 290 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC090826.1-203ENST00000569235 490 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 TXNP4-201ENST00000575018 310 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AL133406.3-201ENST00000606817 541 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 MIR6793-201ENST00000612376 63 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AL021918.2-201ENST00000613415 194 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC245014.3-201ENST00000618589 347 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 MFSD8-239ENST00000641590 2479 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms