Protein–RNA interactions for Protein: Q2TBA0

KLHL40, Kelch-like protein 40, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL40Q2TBA0 AC004817.4-201ENST00000602396 3625 ntBASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 AL009179.1-201ENST00000406085 265 ntBASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 RPL12P18-201ENST00000437175 325 ntBASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 RPL15P21-201ENST00000495592 567 ntBASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 AC002519.2-203ENST00000567043 837 ntBASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 AC124916.2-201ENST00000604416 224 ntBASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 AC073869.8-201ENST00000641806 335 ntBASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 AC073869.10-201ENST00000642016 354 ntBASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.32□□□□□ -1.4
KLHL40Q2TBA0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 QRSL1P1-201ENST00000400977 1540 ntBASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 AC000374.1-201ENST00000434698 1745 ntBASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 MRRFP1-201ENST00000435941 1675 ntBASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 RPL5P7-201ENST00000444235 813 ntBASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 AC005077.1-201ENST00000449226 375 ntBASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 RPL32P33-201ENST00000487023 394 ntBASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 AC009120.1-201ENST00000493458 473 ntBASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 FTH1P11-201ENST00000517577 551 ntBASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 AC005363.1-201ENST00000530779 351 ntBASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 AC068993.1-201ENST00000546724 589 ntBASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 AL157762.1-201ENST00000619612 415 ntBASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 FAM27E2-201ENST00000619668 403 ntBASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 IFIT1P1-201ENST00000400497 1449 ntBASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 AC006600.2-201ENST00000624834 2506 ntBASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 MT-RNR2-201ENST00000387347 1559 ntBASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.31□□□□□ -1.4
KLHL40Q2TBA0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.3□□□□□ -1.4
KLHL40Q2TBA0 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.3□□□□□ -1.4
KLHL40Q2TBA0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
KLHL40Q2TBA0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
KLHL40Q2TBA0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
KLHL40Q2TBA0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.3□□□□□ -1.4
KLHL40Q2TBA0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
KLHL40Q2TBA0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms