Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AC005034.4-201ENST00000603612 899 ntBASIC6.9□□□□□ -1.3
ERVFC1P60507 AL031601.1-201ENST00000605702 394 ntBASIC6.9□□□□□ -1.3
ERVFC1P60507 RN7SKP299-201ENST00000606679 301 ntBASIC6.9□□□□□ -1.3
ERVFC1P60507 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC6.9□□□□□ -1.3
ERVFC1P60507 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.9□□□□□ -1.3
ERVFC1P60507 AC010333.3-201ENST00000615100 402 ntBASIC6.9□□□□□ -1.3
ERVFC1P60507 AC024884.1-201ENST00000620583 399 ntBASIC6.9□□□□□ -1.3
ERVFC1P60507 AL590240.3-201ENST00000621416 943 ntBASIC6.9□□□□□ -1.3
ERVFC1P60507 AC079248.2-201ENST00000623779 326 ntBASIC6.9□□□□□ -1.3
ERVFC1P60507 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC6.9□□□□□ -1.3
ERVFC1P60507 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.9□□□□□ -1.3
ERVFC1P60507 AC016251.2-201ENST00000623393 3089 ntBASIC6.9□□□□□ -1.3
ERVFC1P60507 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.9□□□□□ -1.3
ERVFC1P60507 AC007406.5-201ENST00000570140 3170 ntBASIC6.9□□□□□ -1.31
ERVFC1P60507 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ERVFC1P60507 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.9□□□□□ -1.31
ERVFC1P60507 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ERVFC1P60507 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ERVFC1P60507 CASC19-281ENST00000642118 1554 ntBASIC6.9□□□□□ -1.31
ERVFC1P60507 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ERVFC1P60507 AP005139.1-201ENST00000580702 1647 ntBASIC6.9□□□□□ -1.31
ERVFC1P60507 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.9□□□□□ -1.31
ERVFC1P60507 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
ERVFC1P60507 AC022819.1-201ENST00000563495 3910 ntBASIC6.9□□□□□ -1.31
ERVFC1P60507 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
ERVFC1P60507 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
ERVFC1P60507 KARSP1-201ENST00000451871 1752 ntBASIC6.9□□□□□ -1.31
ERVFC1P60507 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ERVFC1P60507 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ERVFC1P60507 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ERVFC1P60507 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ERVFC1P60507 SPATA31C1-201ENST00000420021 3895 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.89□□□□□ -1.31
ERVFC1P60507 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
ERVFC1P60507 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.89□□□□□ -1.31
ERVFC1P60507 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
ERVFC1P60507 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ERVFC1P60507 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ERVFC1P60507 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
ERVFC1P60507 RNU5E-4P-201ENST00000364931 120 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 SNORA51.9-201ENST00000384295 124 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 RNU6ATAC25P-201ENST00000408798 117 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 RN7SKP281-201ENST00000410472 352 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.89□□□□□ -1.31
ERVFC1P60507 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.89□□□□□ -1.31
ERVFC1P60507 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.89□□□□□ -1.31
ERVFC1P60507 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC6.89□□□□□ -1.31
ERVFC1P60507 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.89□□□□□ -1.31
ERVFC1P60507 AC019178.2-201ENST00000423595 505 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.89□□□□□ -1.31
ERVFC1P60507 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.89□□□□□ -1.31
ERVFC1P60507 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.89□□□□□ -1.31
ERVFC1P60507 MTCYBP3-201ENST00000445588 1137 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.89□□□□□ -1.31
ERVFC1P60507 MRPL42P4-201ENST00000453267 443 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 RPS6P2-201ENST00000454208 705 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 RPL7P45-201ENST00000455851 743 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.89□□□□□ -1.31
ERVFC1P60507 RN7SL101P-201ENST00000496350 279 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ERVFC1P60507 RPL5P11-201ENST00000498068 893 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 AC131392.1-201ENST00000506490 633 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.89□□□□□ -1.31
ERVFC1P60507 AC095052.1-201ENST00000509955 863 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 FABP5P6-201ENST00000510588 409 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 AC006499.4-201ENST00000510947 694 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
ERVFC1P60507 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.89□□□□□ -1.31
ERVFC1P60507 AC119751.1-201ENST00000513357 765 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 SEC11B-201ENST00000518383 499 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.89□□□□□ -1.31
ERVFC1P60507 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.89□□□□□ -1.31
ERVFC1P60507 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.89□□□□□ -1.31
ERVFC1P60507 HMGB1P46-201ENST00000520062 610 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.89□□□□□ -1.31
ERVFC1P60507 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.89□□□□□ -1.31
ERVFC1P60507 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.89□□□□□ -1.31
ERVFC1P60507 AC092868.3-201ENST00000560515 784 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 AC104229.1-201ENST00000561364 255 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 SNORA70D-201ENST00000578836 135 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 RN7SL404P-201ENST00000582421 281 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.89□□□□□ -1.31
ERVFC1P60507 AC010327.2-201ENST00000587647 488 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.89□□□□□ -1.31
ERVFC1P60507 AC008521.2-201ENST00000591021 259 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.89□□□□□ -1.31
ERVFC1P60507 AL021707.7-201ENST00000607991 416 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 AL135786.2-201ENST00000608422 615 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 AC025588.4-201ENST00000615802 908 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 U6atac.1-201ENST00000616025 117 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 AC090617.9-201ENST00000623751 147 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 AC092656.1-203ENST00000624134 423 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 AC007490.1-201ENST00000624321 703 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.89□□□□□ -1.31
ERVFC1P60507 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.89□□□□□ -1.31
ERVFC1P60507 MIR4302-201ENST00000638058 60 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.89□□□□□ -1.31
ERVFC1P60507 AL354854.1-201ENST00000455940 1363 ntBASIC6.89□□□□□ -1.31
ERVFC1P60507 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ERVFC1P60507 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms