Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNA5SP433-201ENST00000364491 114 ntBASIC6.33□□□□□ -1.4
NEK3P51956 OR7E156P-201ENST00000400303 464 ntBASIC6.33□□□□□ -1.4
NEK3P51956 XKRYP4-201ENST00000414395 483 ntBASIC6.33□□□□□ -1.4
NEK3P51956 AC069154.1-201ENST00000432914 542 ntBASIC6.33□□□□□ -1.4
NEK3P51956 AL512661.1-201ENST00000434586 1253 ntBASIC6.33□□□□□ -1.4
NEK3P51956 MTCYBP21-201ENST00000443300 1113 ntBASIC6.33□□□□□ -1.4
NEK3P51956 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NEK3P51956 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.33□□□□□ -1.4
NEK3P51956 XKRYP5-201ENST00000449659 483 ntBASIC6.33□□□□□ -1.4
NEK3P51956 LDHBP2-201ENST00000456969 1005 ntBASIC6.33□□□□□ -1.4
NEK3P51956 AC009963.3-201ENST00000458090 486 ntBASIC6.33□□□□□ -1.4
NEK3P51956 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.33□□□□□ -1.4
NEK3P51956 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC6.33□□□□□ -1.4
NEK3P51956 AC138866.2-201ENST00000508650 584 ntBASIC6.33□□□□□ -1.4
NEK3P51956 AC121161.1-201ENST00000510606 652 ntBASIC6.33□□□□□ -1.4
NEK3P51956 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NEK3P51956 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.33□□□□□ -1.4
NEK3P51956 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.33□□□□□ -1.4
NEK3P51956 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.33□□□□□ -1.4
NEK3P51956 GLYATL1P2-202ENST00000588046 902 ntBASIC6.33□□□□□ -1.4
NEK3P51956 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.33□□□□□ -1.4
NEK3P51956 BNIP3P31-201ENST00000604515 566 ntBASIC6.33□□□□□ -1.4
NEK3P51956 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.33□□□□□ -1.4
NEK3P51956 AL080312.2-201ENST00000613001 630 ntBASIC6.33□□□□□ -1.4
NEK3P51956 AL031658.2-201ENST00000616850 651 ntBASIC6.33□□□□□ -1.4
NEK3P51956 MIR6778-201ENST00000617912 73 ntBASIC6.33□□□□□ -1.4
NEK3P51956 AC145207.9-201ENST00000623802 325 ntBASIC6.33□□□□□ -1.4
NEK3P51956 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.33□□□□□ -1.4
NEK3P51956 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NEK3P51956 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.33□□□□□ -1.4
NEK3P51956 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.33□□□□□ -1.4
NEK3P51956 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.33□□□□□ -1.4
NEK3P51956 RBPJP2-201ENST00000618187 1444 ntBASIC6.33□□□□□ -1.4
NEK3P51956 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NEK3P51956 AC096921.2-201ENST00000561507 1916 ntBASIC6.33□□□□□ -1.4
NEK3P51956 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
NEK3P51956 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
NEK3P51956 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEK3P51956 AC007996.1-201ENST00000620414 2821 ntBASIC6.32□□□□□ -1.4
NEK3P51956 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEK3P51956 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEK3P51956 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NEK3P51956 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NEK3P51956 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
NEK3P51956 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
NEK3P51956 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NEK3P51956 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
NEK3P51956 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NEK3P51956 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
NEK3P51956 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
NEK3P51956 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.32□□□□□ -1.4
NEK3P51956 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NEK3P51956 RN7SKP151-201ENST00000410230 316 ntBASIC6.32□□□□□ -1.4
NEK3P51956 RN7SKP121-201ENST00000410842 305 ntBASIC6.32□□□□□ -1.4
NEK3P51956 RNU4-27P-201ENST00000410889 139 ntBASIC6.32□□□□□ -1.4
NEK3P51956 VN1R42P-201ENST00000424651 344 ntBASIC6.32□□□□□ -1.4
NEK3P51956 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.32□□□□□ -1.4
NEK3P51956 AC092651.1-201ENST00000426110 312 ntBASIC6.32□□□□□ -1.4
NEK3P51956 CACYBPP1-201ENST00000438592 684 ntBASIC6.32□□□□□ -1.4
NEK3P51956 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.32□□□□□ -1.4
NEK3P51956 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.32□□□□□ -1.4
NEK3P51956 AL590004.3-202ENST00000445883 451 ntBASIC6.32□□□□□ -1.4
NEK3P51956 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.32□□□□□ -1.4
NEK3P51956 RPL7P55-201ENST00000450522 746 ntBASIC6.32□□□□□ -1.4
NEK3P51956 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.32□□□□□ -1.4
NEK3P51956 Z83838.1-202ENST00000456225 839 ntBASIC6.32□□□□□ -1.4
NEK3P51956 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.32□□□□□ -1.4
NEK3P51956 AC012123.2-201ENST00000485809 248 ntBASIC6.32□□□□□ -1.4
NEK3P51956 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.32□□□□□ -1.4
NEK3P51956 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.32□□□□□ -1.4
NEK3P51956 RNU6-1004P-201ENST00000516584 111 ntBASIC6.32□□□□□ -1.4
NEK3P51956 RNU6-334P-201ENST00000517072 102 ntBASIC6.32□□□□□ -1.4
NEK3P51956 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
NEK3P51956 CIR1P1-201ENST00000524055 1133 ntBASIC6.32□□□□□ -1.4
NEK3P51956 SOX5P1-201ENST00000524155 1127 ntBASIC6.32□□□□□ -1.4
NEK3P51956 AC068339.2-201ENST00000534395 618 ntBASIC6.32□□□□□ -1.4
NEK3P51956 AP002373.2-201ENST00000541631 1060 ntBASIC6.32□□□□□ -1.4
NEK3P51956 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.32□□□□□ -1.4
NEK3P51956 AC122134.1-202ENST00000569111 1201 ntBASIC6.32□□□□□ -1.4
NEK3P51956 MRPS21P8-201ENST00000569196 235 ntBASIC6.32□□□□□ -1.4
NEK3P51956 MIR4701-201ENST00000583094 63 ntBASIC6.32□□□□□ -1.4
NEK3P51956 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.32□□□□□ -1.4
NEK3P51956 AC079315.1-201ENST00000602952 623 ntBASIC6.32□□□□□ -1.4
NEK3P51956 AC027334.1-201ENST00000603257 310 ntBASIC6.32□□□□□ -1.4
NEK3P51956 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.32□□□□□ -1.4
NEK3P51956 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.32□□□□□ -1.4
NEK3P51956 FAM27E2-201ENST00000619668 403 ntBASIC6.32□□□□□ -1.4
NEK3P51956 AC024023.1-201ENST00000624530 922 ntBASIC6.32□□□□□ -1.4
NEK3P51956 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NEK3P51956 AC140134.1-201ENST00000511830 3544 ntBASIC6.32□□□□□ -1.4
NEK3P51956 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NEK3P51956 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEK3P51956 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEK3P51956 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.32□□□□□ -1.4
NEK3P51956 AL121768.1-201ENST00000613917 2544 ntBASIC6.32□□□□□ -1.4
NEK3P51956 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.32□□□□□ -1.4
NEK3P51956 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
NEK3P51956 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NEK3P51956 AL355834.1-201ENST00000556602 3965 ntBASIC6.32□□□□□ -1.4
NEK3P51956 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms