Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.09□□□□□ -1.43
SSR1P43307 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.09□□□□□ -1.43
SSR1P43307 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSR1P43307 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.09□□□□□ -1.43
SSR1P43307 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.09□□□□□ -1.43
SSR1P43307 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSR1P43307 AC093909.5-201ENST00000621839 1799 ntBASIC6.09□□□□□ -1.43
SSR1P43307 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SSR1P43307 COX6B1P3-201ENST00000312310 260 ntBASIC6.09□□□□□ -1.43
SSR1P43307 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSR1P43307 AC126120.1-201ENST00000431082 470 ntBASIC6.09□□□□□ -1.43
SSR1P43307 AC092447.2-201ENST00000435487 669 ntBASIC6.09□□□□□ -1.43
SSR1P43307 PNKDP1-201ENST00000435914 430 ntBASIC6.09□□□□□ -1.43
SSR1P43307 AC015983.1-201ENST00000441577 373 ntBASIC6.09□□□□□ -1.43
SSR1P43307 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSR1P43307 AC118758.1-202ENST00000454719 225 ntBASIC6.09□□□□□ -1.43
SSR1P43307 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.09□□□□□ -1.43
SSR1P43307 AL157777.1-201ENST00000468100 304 ntBASIC6.09□□□□□ -1.43
SSR1P43307 RN7SL57P-201ENST00000493687 290 ntBASIC6.09□□□□□ -1.43
SSR1P43307 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.09□□□□□ -1.43
SSR1P43307 IGKV3D-25-201ENST00000519599 235 ntBASIC6.09□□□□□ -1.43
SSR1P43307 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SSR1P43307 AP004609.2-201ENST00000532177 190 ntBASIC6.09□□□□□ -1.43
SSR1P43307 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.09□□□□□ -1.43
SSR1P43307 AC002310.3-201ENST00000569728 723 ntBASIC6.09□□□□□ -1.43
SSR1P43307 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.09□□□□□ -1.43
SSR1P43307 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.09□□□□□ -1.43
SSR1P43307 MIR6806-201ENST00000622141 64 ntBASIC6.09□□□□□ -1.43
SSR1P43307 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.09□□□□□ -1.43
SSR1P43307 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
SSR1P43307 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SSR1P43307 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SSR1P43307 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSR1P43307 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSR1P43307 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.09□□□□□ -1.43
SSR1P43307 AC112198.2-201ENST00000426589 6996 ntBASIC6.09□□□□□ -1.43
SSR1P43307 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SSR1P43307 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SSR1P43307 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSR1P43307 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSR1P43307 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SSR1P43307 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SSR1P43307 RNFT1P3-201ENST00000340898 1052 ntBASIC6.08□□□□□ -1.44
SSR1P43307 U3.10-201ENST00000364459 214 ntBASIC6.08□□□□□ -1.44
SSR1P43307 RNA5SP91-201ENST00000390902 119 ntBASIC6.08□□□□□ -1.44
SSR1P43307 AC016739.1-201ENST00000405359 345 ntBASIC6.08□□□□□ -1.44
SSR1P43307 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.08□□□□□ -1.44
SSR1P43307 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.08□□□□□ -1.44
SSR1P43307 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.08□□□□□ -1.44
SSR1P43307 AC073072.2-201ENST00000447425 348 ntBASIC6.08□□□□□ -1.44
SSR1P43307 AC068228.1-201ENST00000461723 211 ntBASIC6.08□□□□□ -1.44
SSR1P43307 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.08□□□□□ -1.44
SSR1P43307 AC105384.2-201ENST00000508433 640 ntBASIC6.08□□□□□ -1.44
SSR1P43307 LDHAP1-201ENST00000509421 992 ntBASIC6.08□□□□□ -1.44
SSR1P43307 AC011411.1-201ENST00000509592 876 ntBASIC6.08□□□□□ -1.44
SSR1P43307 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.08□□□□□ -1.44
SSR1P43307 RNA5SP340-201ENST00000517132 107 ntBASIC6.08□□□□□ -1.44
SSR1P43307 RN7SKP183-201ENST00000517169 324 ntBASIC6.08□□□□□ -1.44
SSR1P43307 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.08□□□□□ -1.44
SSR1P43307 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.08□□□□□ -1.44
SSR1P43307 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.08□□□□□ -1.44
SSR1P43307 AL163952.1-202ENST00000569625 600 ntBASIC6.08□□□□□ -1.44
SSR1P43307 AC008507.3-201ENST00000585753 472 ntBASIC6.08□□□□□ -1.44
SSR1P43307 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.08□□□□□ -1.44
SSR1P43307 FAM27E4-201ENST00000605259 342 ntBASIC6.08□□□□□ -1.44
SSR1P43307 AL008729.2-201ENST00000606393 473 ntBASIC6.08□□□□□ -1.44
SSR1P43307 AC008833.1-201ENST00000611633 691 ntBASIC6.08□□□□□ -1.44
SSR1P43307 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSR1P43307 CASC19-238ENST00000641523 1558 ntBASIC6.08□□□□□ -1.44
SSR1P43307 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSR1P43307 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SSR1P43307 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSR1P43307 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC6.08□□□□□ -1.44
SSR1P43307 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.08□□□□□ -1.44
SSR1P43307 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
SSR1P43307 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.08□□□□□ -1.44
SSR1P43307 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SSR1P43307 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSR1P43307 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.07□□□□□ -1.44
SSR1P43307 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSR1P43307 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.07□□□□□ -1.44
SSR1P43307 AC083843.3-201ENST00000623679 2186 ntBASIC6.07□□□□□ -1.44
SSR1P43307 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SSR1P43307 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.07□□□□□ -1.44
SSR1P43307 SNORA68.2-201ENST00000391263 128 ntBASIC6.07□□□□□ -1.44
SSR1P43307 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSR1P43307 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.07□□□□□ -1.44
SSR1P43307 AL354890.1-201ENST00000413730 346 ntBASIC6.07□□□□□ -1.44
SSR1P43307 CLNS1AP1-201ENST00000435954 682 ntBASIC6.07□□□□□ -1.44
SSR1P43307 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.07□□□□□ -1.44
SSR1P43307 AC093166.4-201ENST00000457867 318 ntBASIC6.07□□□□□ -1.44
SSR1P43307 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC6.07□□□□□ -1.44
SSR1P43307 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.07□□□□□ -1.44
SSR1P43307 RBBP4P1-201ENST00000502424 1276 ntBASIC6.07□□□□□ -1.44
SSR1P43307 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.07□□□□□ -1.44
SSR1P43307 AC122718.2-201ENST00000505325 591 ntBASIC6.07□□□□□ -1.44
SSR1P43307 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.07□□□□□ -1.44
SSR1P43307 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.07□□□□□ -1.44
SSR1P43307 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.07□□□□□ -1.44
SSR1P43307 RNA5SP230-201ENST00000517039 122 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 226.2 ms