Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC092070.2-203ENST00000598377 3644 ntBASIC4.89□□□□□ -1.63
USF1P22415 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
USF1P22415 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
USF1P22415 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
USF1P22415 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
USF1P22415 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USF1P22415 OR9K1P-201ENST00000326513 941 ntBASIC4.89□□□□□ -1.63
USF1P22415 SNORA64.1-201ENST00000362600 132 ntBASIC4.89□□□□□ -1.63
USF1P22415 RN7SKP162-201ENST00000363605 345 ntBASIC4.89□□□□□ -1.63
USF1P22415 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.89□□□□□ -1.63
USF1P22415 AP000534.2-201ENST00000412729 568 ntBASIC4.89□□□□□ -1.63
USF1P22415 PTCD2P2-201ENST00000415579 1095 ntBASIC4.89□□□□□ -1.63
USF1P22415 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.89□□□□□ -1.63
USF1P22415 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.89□□□□□ -1.63
USF1P22415 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.89□□□□□ -1.63
USF1P22415 AC092651.1-201ENST00000426110 312 ntBASIC4.89□□□□□ -1.63
USF1P22415 AL627308.1-201ENST00000435693 821 ntBASIC4.89□□□□□ -1.63
USF1P22415 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
USF1P22415 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.89□□□□□ -1.63
USF1P22415 AC093166.4-201ENST00000457867 318 ntBASIC4.89□□□□□ -1.63
USF1P22415 AC108751.3-201ENST00000461814 1020 ntBASIC4.89□□□□□ -1.63
USF1P22415 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USF1P22415 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.89□□□□□ -1.63
USF1P22415 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.89□□□□□ -1.63
USF1P22415 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.89□□□□□ -1.63
USF1P22415 AC027026.1-201ENST00000532323 742 ntBASIC4.89□□□□□ -1.63
USF1P22415 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.89□□□□□ -1.63
USF1P22415 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.89□□□□□ -1.63
USF1P22415 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.89□□□□□ -1.63
USF1P22415 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.89□□□□□ -1.63
USF1P22415 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.89□□□□□ -1.63
USF1P22415 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.89□□□□□ -1.63
USF1P22415 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.89□□□□□ -1.63
USF1P22415 AL445670.1-201ENST00000618889 801 ntBASIC4.89□□□□□ -1.63
USF1P22415 CU639417.4-201ENST00000623928 207 ntBASIC4.89□□□□□ -1.63
USF1P22415 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.89□□□□□ -1.63
USF1P22415 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.89□□□□□ -1.63
USF1P22415 AC000095.2-202ENST00000637415 154 ntBASIC4.89□□□□□ -1.63
USF1P22415 MAPK10-350ENST00000641777 965 ntBASIC4.89□□□□□ -1.63
USF1P22415 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
USF1P22415 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.89□□□□□ -1.63
USF1P22415 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
USF1P22415 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.89□□□□□ -1.63
USF1P22415 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.89□□□□□ -1.63
USF1P22415 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.89□□□□□ -1.63
USF1P22415 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
USF1P22415 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
USF1P22415 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.89□□□□□ -1.63
USF1P22415 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
USF1P22415 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.89□□□□□ -1.63
USF1P22415 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.89□□□□□ -1.63
USF1P22415 THAP12P9-201ENST00000503971 2360 ntBASIC4.89□□□□□ -1.63
USF1P22415 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USF1P22415 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USF1P22415 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.88□□□□□ -1.63
USF1P22415 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USF1P22415 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
USF1P22415 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.88□□□□□ -1.63
USF1P22415 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USF1P22415 AL359955.1-201ENST00000455242 3275 ntBASIC4.88□□□□□ -1.63
USF1P22415 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
USF1P22415 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USF1P22415 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
USF1P22415 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
USF1P22415 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.88□□□□□ -1.63
USF1P22415 RN7SKP124-201ENST00000364730 341 ntBASIC4.88□□□□□ -1.63
USF1P22415 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.88□□□□□ -1.63
USF1P22415 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USF1P22415 AL121977.1-201ENST00000401636 979 ntBASIC4.88□□□□□ -1.63
USF1P22415 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.88□□□□□ -1.63
USF1P22415 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USF1P22415 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.88□□□□□ -1.63
USF1P22415 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.88□□□□□ -1.63
USF1P22415 MYL6P5-201ENST00000412707 459 ntBASIC4.88□□□□□ -1.63
USF1P22415 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC4.88□□□□□ -1.63
USF1P22415 AL590399.2-201ENST00000427536 309 ntBASIC4.88□□□□□ -1.63
USF1P22415 AC023141.8-201ENST00000442554 208 ntBASIC4.88□□□□□ -1.63
USF1P22415 CUBNP2-201ENST00000443534 1139 ntBASIC4.88□□□□□ -1.63
USF1P22415 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.88□□□□□ -1.63
USF1P22415 AC005297.1-201ENST00000444765 862 ntBASIC4.88□□□□□ -1.63
USF1P22415 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.88□□□□□ -1.63
USF1P22415 RPS17P15-201ENST00000475609 349 ntBASIC4.88□□□□□ -1.63
USF1P22415 TRBV5-2-201ENST00000489095 273 ntBASIC4.88□□□□□ -1.63
USF1P22415 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.88□□□□□ -1.63
USF1P22415 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.88□□□□□ -1.63
USF1P22415 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.88□□□□□ -1.63
USF1P22415 SNORA70.11-201ENST00000515987 138 ntBASIC4.88□□□□□ -1.63
USF1P22415 SNORA70.13-201ENST00000516116 138 ntBASIC4.88□□□□□ -1.63
USF1P22415 RNA5SP34-201ENST00000516887 130 ntBASIC4.88□□□□□ -1.63
USF1P22415 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.88□□□□□ -1.63
USF1P22415 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.88□□□□□ -1.63
USF1P22415 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.88□□□□□ -1.63
USF1P22415 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.88□□□□□ -1.63
USF1P22415 GARSP1-201ENST00000570895 719 ntBASIC4.88□□□□□ -1.63
USF1P22415 TXNP4-201ENST00000575018 310 ntBASIC4.88□□□□□ -1.63
USF1P22415 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.88□□□□□ -1.63
USF1P22415 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.88□□□□□ -1.63
USF1P22415 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USF1P22415 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.88□□□□□ -1.63
USF1P22415 uc_338.26-201ENST00000612659 160 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms