Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL1A1P02452 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL1A1P02452 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.6□□□□□ -1.35
COL1A1P02452 LCOR-201ENST00000286067 4542 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL1A1P02452 AC007114.2-201ENST00000576014 4281 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
COL1A1P02452 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
COL1A1P02452 RNU1-146P-201ENST00000364015 165 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 RNU1-149P-201ENST00000390870 161 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 DBIP1-201ENST00000401435 260 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 DUTP5-201ENST00000406790 469 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.6□□□□□ -1.35
COL1A1P02452 RPL34P27-201ENST00000428810 349 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 FAM96AP1-201ENST00000430879 482 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 AL672138.1-201ENST00000450604 1015 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.6□□□□□ -1.35
COL1A1P02452 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.6□□□□□ -1.35
COL1A1P02452 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.6□□□□□ -1.35
COL1A1P02452 RNA5SP228-201ENST00000516232 133 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.6□□□□□ -1.35
COL1A1P02452 HMGB1P40-201ENST00000525121 540 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 AC122688.1-201ENST00000541494 223 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 OR1F2P-201ENST00000570470 933 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL1A1P02452 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL1A1P02452 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL1A1P02452 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.59□□□□□ -1.35
COL1A1P02452 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL1A1P02452 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.59□□□□□ -1.35
COL1A1P02452 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.59□□□□□ -1.35
COL1A1P02452 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
COL1A1P02452 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.59□□□□□ -1.35
COL1A1P02452 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL1A1P02452 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.59□□□□□ -1.35
COL1A1P02452 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
COL1A1P02452 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
COL1A1P02452 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.59□□□□□ -1.36
COL1A1P02452 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.59□□□□□ -1.36
COL1A1P02452 RPS26P13-201ENST00000419030 330 ntBASIC6.59□□□□□ -1.36
COL1A1P02452 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.59□□□□□ -1.36
COL1A1P02452 RPS23P9-201ENST00000448848 438 ntBASIC6.59□□□□□ -1.36
COL1A1P02452 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.59□□□□□ -1.36
COL1A1P02452 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.59□□□□□ -1.36
COL1A1P02452 HMGB1P44-201ENST00000508597 572 ntBASIC6.59□□□□□ -1.36
COL1A1P02452 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.59□□□□□ -1.36
COL1A1P02452 RNA5SP373-201ENST00000517271 95 ntBASIC6.59□□□□□ -1.36
COL1A1P02452 AC013701.1-201ENST00000522657 465 ntBASIC6.59□□□□□ -1.36
COL1A1P02452 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.59□□□□□ -1.36
COL1A1P02452 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.59□□□□□ -1.36
COL1A1P02452 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
COL1A1P02452 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.59□□□□□ -1.36
COL1A1P02452 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.59□□□□□ -1.36
COL1A1P02452 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.59□□□□□ -1.36
COL1A1P02452 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
COL1A1P02452 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
COL1A1P02452 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
COL1A1P02452 UGT2B24P-201ENST00000514441 1597 ntBASIC6.58□□□□□ -1.36
COL1A1P02452 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.58□□□□□ -1.36
COL1A1P02452 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 OR4F13P-202ENST00000560066 2054 ntBASIC6.58□□□□□ -1.36
COL1A1P02452 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 AC011493.1-201ENST00000596753 1632 ntBASIC6.58□□□□□ -1.36
COL1A1P02452 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.58□□□□□ -1.36
COL1A1P02452 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
COL1A1P02452 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.58□□□□□ -1.36
COL1A1P02452 AC092017.2-201ENST00000427600 362 ntBASIC6.58□□□□□ -1.36
COL1A1P02452 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.58□□□□□ -1.36
COL1A1P02452 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.58□□□□□ -1.36
COL1A1P02452 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.58□□□□□ -1.36
COL1A1P02452 AL445528.2-201ENST00000620582 470 ntBASIC6.58□□□□□ -1.36
COL1A1P02452 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.58□□□□□ -1.36
COL1A1P02452 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.58□□□□□ -1.36
COL1A1P02452 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 AC232271.1-201ENST00000602455 2715 ntBASIC6.58□□□□□ -1.36
COL1A1P02452 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
COL1A1P02452 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL1A1P02452 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL1A1P02452 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL1A1P02452 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL1A1P02452 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
COL1A1P02452 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.57□□□□□ -1.36
COL1A1P02452 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
COL1A1P02452 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.57□□□□□ -1.36
COL1A1P02452 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 161 ms