Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC8.2□□□□□ -1.1
HOXA2O43364 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC8.2□□□□□ -1.1
HOXA2O43364 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC8.2□□□□□ -1.1
HOXA2O43364 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
HOXA2O43364 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXA2O43364 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC8.2□□□□□ -1.1
HOXA2O43364 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXA2O43364 ST5-237ENST00000530991 3396 ntTSL 2 BASIC8.2□□□□□ -1.1
HOXA2O43364 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
HOXA2O43364 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
HOXA2O43364 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
HOXA2O43364 SOCS5P5-201ENST00000402732 1586 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 Y_RNA.86-201ENST00000363020 111 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 Y_RNA.409-201ENST00000383990 98 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 Y_RNA.431-201ENST00000384086 102 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
HOXA2O43364 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
HOXA2O43364 RPL23AP29-201ENST00000397284 453 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 SNRPEP2-201ENST00000397592 279 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 LARP1P1-201ENST00000407692 292 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 SOD1P1-201ENST00000407803 440 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 SNORA2C-201ENST00000408564 137 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 GAS8-AS1-201ENST00000408886 435 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
HOXA2O43364 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC8.2□□□□□ -1.1
HOXA2O43364 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC8.2□□□□□ -1.1
HOXA2O43364 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
HOXA2O43364 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC8.2□□□□□ -1.1
HOXA2O43364 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC8.2□□□□□ -1.1
HOXA2O43364 Z93242.1-201ENST00000427102 353 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 SAR1AP4-201ENST00000429225 591 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 SKP1P3-201ENST00000429280 487 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 RPL37P21-201ENST00000435890 276 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 AC015983.1-201ENST00000441577 373 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 CDC42P2-201ENST00000448566 569 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC8.2□□□□□ -1.1
HOXA2O43364 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC8.2□□□□□ -1.1
HOXA2O43364 SNORA35.1-201ENST00000458908 128 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 FAM172BP-201ENST00000487497 1089 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 AC233724.1-201ENST00000503894 233 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 AC108064.1-201ENST00000513791 460 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC8.2□□□□□ -1.1
HOXA2O43364 AC022878.1-201ENST00000530684 149 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 OR4C1P-201ENST00000530880 937 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 DPPA3P2-202ENST00000557188 1219 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 WDR61-205ENST00000558459 884 ntTSL 3 BASIC8.2□□□□□ -1.1
HOXA2O43364 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC8.2□□□□□ -1.1
HOXA2O43364 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC8.2□□□□□ -1.1
HOXA2O43364 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC8.2□□□□□ -1.1
HOXA2O43364 MIR5697-201ENST00000578045 78 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.2□□□□□ -1.1
HOXA2O43364 AL096855.2-201ENST00000605785 369 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC8.2□□□□□ -1.1
HOXA2O43364 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC8.2□□□□□ -1.1
HOXA2O43364 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC8.2□□□□□ -1.1
HOXA2O43364 AC008121.3-201ENST00000618726 433 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 AL121985.3-201ENST00000620690 523 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC8.2□□□□□ -1.1
HOXA2O43364 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXA2O43364 DDX10P2-201ENST00000417796 2614 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC8.2□□□□□ -1.1
HOXA2O43364 AL161891.1-201ENST00000621575 4636 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC8.2□□□□□ -1.1
HOXA2O43364 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXA2O43364 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC8.2□□□□□ -1.1
HOXA2O43364 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
HOXA2O43364 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
HOXA2O43364 TRIM53BP-201ENST00000532912 1720 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
HOXA2O43364 MAPK10-290ENST00000641237 2826 ntBASIC8.2□□□□□ -1.1
HOXA2O43364 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
HOXA2O43364 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
HOXA2O43364 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXA2O43364 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXA2O43364 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
HOXA2O43364 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
HOXA2O43364 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
HOXA2O43364 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC8.19□□□□□ -1.1
HOXA2O43364 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8.19□□□□□ -1.1
HOXA2O43364 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 Y_RNA.1-201ENST00000352915 104 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 ARMCX7P-201ENST00000372828 562 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
HOXA2O43364 Y_RNA.394-201ENST00000383942 103 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 RNU6-767P-201ENST00000384132 107 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
HOXA2O43364 RNA5SP35-201ENST00000391257 129 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 SRI-202ENST00000394641 653 ntTSL 2 BASIC8.19□□□□□ -1.1
HOXA2O43364 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC8.19□□□□□ -1.1
HOXA2O43364 RPS24P12-201ENST00000402084 394 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms