Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC099654.10-201ENST00000640395 161 ntBASIC7.28□□□□□ -1.24
SOX1O00570 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.28□□□□□ -1.24
SOX1O00570 AL354854.1-201ENST00000455940 1363 ntBASIC7.28□□□□□ -1.24
SOX1O00570 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
SOX1O00570 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 AC016930.1-201ENST00000468766 2205 ntBASIC7.28□□□□□ -1.24
SOX1O00570 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
SOX1O00570 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
SOX1O00570 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.27□□□□□ -1.24
SOX1O00570 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
SOX1O00570 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.27□□□□□ -1.24
SOX1O00570 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 AL355974.1-201ENST00000618896 1708 ntBASIC7.27□□□□□ -1.25
SOX1O00570 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.27□□□□□ -1.25
SOX1O00570 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
SOX1O00570 Y_RNA.359-201ENST00000365498 102 ntBASIC7.27□□□□□ -1.25
SOX1O00570 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC7.27□□□□□ -1.25
SOX1O00570 RNU6-761P-201ENST00000384148 107 ntBASIC7.27□□□□□ -1.25
SOX1O00570 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
SOX1O00570 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX1O00570 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.27□□□□□ -1.25
SOX1O00570 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.27□□□□□ -1.25
SOX1O00570 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC7.27□□□□□ -1.25
SOX1O00570 GAPDHP58-201ENST00000438477 1006 ntBASIC7.27□□□□□ -1.25
SOX1O00570 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
SOX1O00570 CNOT7P2-201ENST00000441051 832 ntBASIC7.27□□□□□ -1.25
SOX1O00570 RPL21P133-201ENST00000443666 476 ntBASIC7.27□□□□□ -1.25
SOX1O00570 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX1O00570 H2AFZP6-201ENST00000444403 394 ntBASIC7.27□□□□□ -1.25
SOX1O00570 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX1O00570 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.27□□□□□ -1.25
SOX1O00570 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX1O00570 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX1O00570 AC023194.2-201ENST00000465398 406 ntBASIC7.27□□□□□ -1.25
SOX1O00570 RPSAP39-201ENST00000467439 883 ntBASIC7.27□□□□□ -1.25
SOX1O00570 AC011979.1-201ENST00000472300 483 ntBASIC7.27□□□□□ -1.25
SOX1O00570 UBFD1P1-201ENST00000473259 814 ntBASIC7.27□□□□□ -1.25
SOX1O00570 RN7SL797P-201ENST00000486314 297 ntBASIC7.27□□□□□ -1.25
SOX1O00570 AL136038.1-201ENST00000497246 351 ntBASIC7.27□□□□□ -1.25
SOX1O00570 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX1O00570 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX1O00570 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.27□□□□□ -1.25
SOX1O00570 CYCSP25-201ENST00000525280 316 ntBASIC7.27□□□□□ -1.25
SOX1O00570 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC7.27□□□□□ -1.25
SOX1O00570 HIGD1AP5-201ENST00000529959 259 ntBASIC7.27□□□□□ -1.25
SOX1O00570 RPS3AP4-201ENST00000555161 764 ntBASIC7.27□□□□□ -1.25
SOX1O00570 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX1O00570 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC7.27□□□□□ -1.25
SOX1O00570 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.27□□□□□ -1.25
SOX1O00570 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX1O00570 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX1O00570 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.27□□□□□ -1.25
SOX1O00570 AL451074.6-201ENST00000608512 729 ntBASIC7.27□□□□□ -1.25
SOX1O00570 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.27□□□□□ -1.25
SOX1O00570 AL121873.1-201ENST00000616013 524 ntBASIC7.27□□□□□ -1.25
SOX1O00570 FRG1HP-204ENST00000617940 757 ntBASIC7.27□□□□□ -1.25
SOX1O00570 RMST_5.1-201ENST00000618704 126 ntBASIC7.27□□□□□ -1.25
SOX1O00570 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
SOX1O00570 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC7.27□□□□□ -1.25
SOX1O00570 UGT2B24P-201ENST00000514441 1597 ntBASIC7.27□□□□□ -1.25
SOX1O00570 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.27□□□□□ -1.25
SOX1O00570 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.27□□□□□ -1.25
SOX1O00570 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.27□□□□□ -1.25
SOX1O00570 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC7.27□□□□□ -1.25
SOX1O00570 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.27□□□□□ -1.25
SOX1O00570 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.27□□□□□ -1.25
SOX1O00570 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
SOX1O00570 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.27□□□□□ -1.25
SOX1O00570 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 AC092447.7-201ENST00000422212 1621 ntBASIC7.27□□□□□ -1.25
SOX1O00570 AL137100.1-201ENST00000556703 1620 ntBASIC7.27□□□□□ -1.25
SOX1O00570 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms