Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 TSSK4-201ENST00000287913 1257 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 TFF1-201ENST00000291527 551 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 MAP1LC3C-201ENST00000357246 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 CD3D-202ENST00000392884 476 ntTSL 2 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 MORF4L1P1-201ENST00000404582 967 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC234782.4-201ENST00000417646 1048 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 MCFD2P1-201ENST00000417812 300 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 IGKV1OR9-1-201ENST00000424370 284 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC007559.1-201ENST00000428736 355 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC006335.2-201ENST00000437993 330 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC027124.1-201ENST00000440852 466 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 RPL17P49-201ENST00000443728 411 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AL365436.1-201ENST00000452587 495 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 RN7SL77P-201ENST00000473332 294 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 TRIM2-207ENST00000482578 773 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 ALG13-214ENST00000482742 620 ntTSL 2 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 RN7SL630P-201ENST00000483714 297 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 RN7SL135P-201ENST00000490144 278 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC098583.2-201ENST00000504151 372 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 POU5F1P7-201ENST00000508759 541 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 RNU6-976P-201ENST00000516086 111 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AP005902.2-201ENST00000518393 307 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 TPRXL-211ENST00000532880 754 ntTSL 2 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC120498.4-201ENST00000561649 320 ntTSL 3 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 HLA-P-207ENST00000568192 747 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC005552.1-201ENST00000577556 662 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC067796.1-201ENST00000586795 496 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AL158151.4-201ENST00000600965 507 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AL359704.2-201ENST00000604335 521 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 KHDC1-206ENST00000610330 632 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC107871.2-201ENST00000612894 502 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AP004607.9-201ENST00000618202 316 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC009161.2-201ENST00000624626 138 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 OLMALINC-206ENST00000641799 1195 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC104964.2-201ENST00000562242 4641 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 AC009148.1-201ENST00000570148 2693 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 MAPK10-285ENST00000641207 2746 ntBASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 BCAT1-206ENST00000539780 1360 ntTSL 2 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 OR4G1P-202ENST00000641173 1788 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 TLK2P2-201ENST00000414066 2240 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AC016251.1-201ENST00000624299 4198 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 SNORA55-201ENST00000364587 135 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 MIR595-201ENST00000384905 96 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 IL6-203ENST00000401651 539 ntTSL 2 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 RNU6-370P-201ENST00000411008 104 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 SNAI1P1-201ENST00000428587 777 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AC007683.1-201ENST00000432746 591 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms