Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 FRG1DP-201ENST00000635586 771 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 RNA5SP375-201ENST00000362975 119 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 ST13P16-201ENST00000401760 781 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AL049545.1-201ENST00000401856 572 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 SNORA77.2-201ENST00000408571 112 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 RN7SKP240-201ENST00000410583 375 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 RN7SKP121-201ENST00000410842 305 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 Z68694.1-201ENST00000413929 841 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AL158827.1-201ENST00000416300 391 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AC234771.2-201ENST00000445718 597 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 HMGB1P26-201ENST00000452520 628 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 RN7SL369P-201ENST00000477138 299 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AC093719.1-201ENST00000480427 441 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 MTCO3P35-201ENST00000485582 781 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 GM2AP2-201ENST00000491764 562 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 SNX18P25-201ENST00000510539 758 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AC093816.1-201ENST00000515076 913 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AC027308.1-201ENST00000517993 110 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AP001858.2-201ENST00000536213 601 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 MT1CP-201ENST00000567054 174 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 RN7SL230P-201ENST00000580835 303 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AC015849.2-201ENST00000605738 409 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 OR7A19P-201ENST00000608051 733 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 CUL4AP1-201ENST00000514750 1863 ntBASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.12□□□□□ -1.27
CHAMP1Q96JM3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 AC010894.1-201ENST00000313760 361 ntBASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 GAPDHP15-201ENST00000398586 975 ntBASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 RPL5P19-201ENST00000404228 893 ntBASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 AC108103.1-201ENST00000511286 446 ntBASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 Y_RNA.710-201ENST00000516975 110 ntBASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.11□□□□□ -1.27
CHAMP1Q96JM3 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms