Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC012414.2-201ENST00000559474 187 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 AC009962.1-201ENST00000567327 3813 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 GARSP1-201ENST00000570895 719 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 MIR6823-201ENST00000622118 61 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 AL603750.1-201ENST00000624216 1717 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 MFSD8-219ENST00000641228 2559 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 AC007342.7-201ENST00000624610 2337 ntBASIC5.59□□□□□ -1.51
VPS33AQ96AX1 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 AC104964.3-201ENST00000606115 2860 ntBASIC5.59□□□□□ -1.51
VPS33AQ96AX1 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 AL133260.1-201ENST00000405720 405 ntBASIC5.59□□□□□ -1.51
VPS33AQ96AX1 RNA5SP198-201ENST00000410376 127 ntBASIC5.59□□□□□ -1.51
VPS33AQ96AX1 RN7SKP279-201ENST00000411383 298 ntBASIC5.59□□□□□ -1.51
VPS33AQ96AX1 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 AL590623.1-201ENST00000427864 105 ntBASIC5.59□□□□□ -1.51
VPS33AQ96AX1 RPS27AP6-201ENST00000427962 448 ntBASIC5.59□□□□□ -1.51
VPS33AQ96AX1 AC007563.3-201ENST00000433233 371 ntBASIC5.59□□□□□ -1.51
VPS33AQ96AX1 MRPS33P4-201ENST00000434892 317 ntBASIC5.59□□□□□ -1.51
VPS33AQ96AX1 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 MTCO2P22-201ENST00000603246 681 ntBASIC5.59□□□□□ -1.51
VPS33AQ96AX1 AP004372.1-201ENST00000604842 844 ntBASIC5.59□□□□□ -1.51
VPS33AQ96AX1 AC011891.2-201ENST00000604949 397 ntBASIC5.59□□□□□ -1.51
VPS33AQ96AX1 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 AC015712.7-201ENST00000615211 635 ntBASIC5.59□□□□□ -1.51
VPS33AQ96AX1 AL512652.1-201ENST00000619006 500 ntBASIC5.59□□□□□ -1.51
VPS33AQ96AX1 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS33AQ96AX1 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.59□□□□□ -1.52
VPS33AQ96AX1 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.59□□□□□ -1.52
VPS33AQ96AX1 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 RBPJP2-201ENST00000618187 1444 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC093849.1-201ENST00000563631 2209 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 PSMA6P1-201ENST00000400275 741 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 RNU2-18P-201ENST00000411224 162 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 RPS4XP5-201ENST00000419038 768 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 NENFP1-201ENST00000419476 466 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 GNG5P5-201ENST00000420444 220 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms